LOCUS       XM_039100505            1632 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosome biogenesis protein erb1-like
            (LOC120099333), mRNA.
ACCESSION   XM_039100505
VERSION     XM_039100505.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1632
                     /gene="LOC120099333"
                     /note="ribosome biogenesis protein erb1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 91% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:120099333"
                     /db_xref="RGD:41287312"
     CDS             1..1311
                     /gene="LOC120099333"
                     /codon_start=1
                     /product="ribosome biogenesis protein erb1-like"
                     /protein_id="XP_038956433.1"
                     /db_xref="GeneID:120099333"
                     /db_xref="RGD:41287312"
                     /translation="MAKLRSISCDPKAGESSSSSSSSLLSSSPPLSLSSPPPPPFLRP
                     PGASAWRLFARADISQAFLEIVVARRLCLKMSGEDEIIYINRDSDTDESISDDGDVLF
                     SEDFSSEIVEDTSSFEGLTIDSELEDSDDSFEEESLPEIEDDDDDDDDDDGADGDDED
                     DEDDEDDDEVYEEILPEDLRRHSPSSVASPLTKRRRSSISDTFMRKCGEPLSPAVQAV
                     EGQDNPDRRVLQPVAEDNREKLVPDTDLDPRDGGAQEINTVTISSNQPAVEAPLVFQK
                     PLDSIPTNGPNAMIDPDIVGIKNIIPDMVAPFVYIPPNLEIPDFTEVIIRNNTVMMSN
                     PTSEENQQDSFNPPVYHNFGIPVIPEAVLVNNPETVNYPPSTANTSGHQNLFSSTGPT
                     TAPEIKEVVLVECQKKLKLSWTAISRQYIALLYWEMLFPQMLKL"
ORIGIN      
        1 atggcaaaac tcaggagcat cagctgtgat cccaaagctg gcgagtcctc gtcctcgtcc
       61 tcgtcatcct tgttgtcgtc gtcgccgcct ttgtcgttgt cgtcgccgcc gccgccgcct
      121 tttttacgcc ctccaggagc gagcgcttgg cgcttgtttg ctcgtgcaga catttcccaa
      181 gcgtttttgg agatagtcgt tgcaaggcgc ctgtgcctca agatgtctgg agaggacgag
      241 atcatttata taaataggga tagcgacact gatgaaagca tcagcgatga tggagatgta
      301 ctatttagtg aagattttag ttccgagatt gttgaggata catcgagttt tgaaggcttg
      361 accattgact ctgaacttga agactctgac gacagctttg aagaagaatc cctacctgag
      421 attgaagatg atgatgatga tgatgatgat gacgatggag ctgatggaga tgatgaggat
      481 gatgaagacg atgaagatga tgatgaagtt tatgaagaaa ttcttccaga agatttaaga
      541 agacacagcc ctagctcagt ggcttcccca ttaaccaaaa gaagacgatc atctatttca
      601 gatactttta tgagaaaatg tggtgagcca ttaagcccag cagtgcaagc agttgagggc
      661 caggacaatc ctgacagaag agttcttcag ccagtggcag aggacaaccg tgaaaagcta
      721 gttcctgata ctgacttaga tccccgtgat ggaggtgctc aagaaatcaa cactgtcacc
      781 atctcatcta accagcctgc tgtggaagct cctctagtat ttcagaaacc actggactcc
      841 attccaacta atggccctaa tgccatgatt gacccagata ttgtgggaat taagaacatc
      901 atcccagata tggtcgcacc atttgtctac atccctccca atttggaaat accagatttt
      961 acagaagtca ttattagaaa caacactgtg atgatgagca acccaacttc tgaggaaaat
     1021 caacaagata gtttcaatcc acctgtctat cacaactttg gtattccagt aataccagaa
     1081 gctgtcttgg taaacaatcc tgagacagtg aattacccac cttcaactgc aaataccagt
     1141 ggccaccaaa atttattttc atcgactgga cctactactg ctcctgagat caaagaagtt
     1201 gtactagtag aatgccagaa aaaactgaag ttgtcgtgga cggcaataag cagacagtat
     1261 attgccctgc tttattggga aatgttgttc ccccagatgc tgaaactata gctgcttcta
     1321 ttgcttctaa gtctgtcatt gaaaaacttg tactggtgga aatgccaatt gatccagaat
     1381 gtatcgtgga tggcagccct gagaaactga ataaccccat tgtagtgcag caatgttcag
     1441 ggccaagatc ctgctgcagc atcccttgtg cctttggcag ttggtgagtt tgaaataaca
     1501 gagtcctgcc cgtgctattt catctaggct tagcaacacc ctcagtgcag ctagtgctag
     1561 cccgttctta gactaagctt ctatctatgt gataacttca gatacacata atagctgcaa
     1621 taaatataca ga
//
