LOCUS       XM_039100459             507 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus high mobility group protein B4-like
            (LOC120099313), mRNA.
ACCESSION   XM_039100459
VERSION     XM_039100459.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100459.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..507
                     /gene="LOC120099313"
                     /note="high mobility group protein B4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:120099313"
                     /db_xref="RGD:41219408"
     CDS             1..507
                     /gene="LOC120099313"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_038956387.1"
                     /db_xref="GeneID:120099313"
                     /db_xref="RGD:41219408"
                     /translation="MGKESKLRAKVNVSPYVHFMIDFKNQMKEQQPNTYYDFTEFSRK
                     CSEKWRTISKKEKKKYEALAKRDKVRYQHEMRNYTGPRRQRRRRDANVPRKPPSSFLL
                     FSMDHFDQIKEKHPNWAVAQVAKAARRMWSRSAEVDKIPYEEKAAILWAKYLEEREAY
                     YHQCQRGK"
ORIGIN      
        1 atgggaaaag aaagcaaact aagagcaaag gtgaacgtct ctccttacgt ccattttatg
       61 atcgacttca aaaatcaaat gaaggagcaa cagccaaaca cctattatga ctttaccgaa
      121 ttttctagaa agtgttctga aaagtggagg accatctcga agaaggaaaa gaagaagtat
      181 gaagccctag ccaagcgcga caaagttcgg taccaacatg aaatgagaaa ctacaccgga
      241 ccaagaaggc agagaagaag gagggatgcg aatgtaccgc ggaagccccc atcctcattc
      301 ctgctcttct ccatggatca ctttgaccag ataaaagaaa aacacccaaa ctgggctgtg
      361 gcgcaggtgg ccaaggctgc cagaaggatg tggtccaggt ctgcggaagt ggacaaaatc
      421 ccctatgagg agaaggctgc tattctgtgg gcaaagtacc ttgaagagcg ggaggcctac
      481 taccaccaat gccagcgtgg gaagtaa
//
