LOCUS       XM_039100439             695 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus rho GTPase-activating protein 20-like
            (LOC120099294), transcript variant X1, mRNA.
ACCESSION   XM_039100439
VERSION     XM_039100439.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100439.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..695
                     /gene="LOC120099294"
                     /note="rho GTPase-activating protein 20-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:120099294"
                     /db_xref="RGD:41072671"
     CDS             173..610
                     /gene="LOC120099294"
                     /codon_start=1
                     /product="rho GTPase-activating protein 20-like"
                     /protein_id="XP_038956367.1"
                     /db_xref="GeneID:120099294"
                     /db_xref="RGD:41072671"
                     /translation="METHGEKATLFHGVRGSLLLEGPVEFRRGWRKKKRHLFLLNDLL
                     VVSNNIHKKKFKIKYIIPLSYLWICDYADLVGGDNRTASKSIFLCWPMENFVATFCTK
                     EQKKWWWFFLQRYINEAKMNGESKSAALQMVTEDIRRCTSACA"
ORIGIN      
        1 ccatgactcc tgcagaactc tcacacttca gcagttggtc tgccaactgc tgtagttgtc
       61 tttgatgttt agtgccaagg aagaagtaga gtttcaagtc ctttgaaaga ctacccggtc
      121 caggatccct gtgaagtgtt tggcctgtac caggaaaaag ctttctcctc acatggaaac
      181 ccacggtgag aaagcgacac tatttcatgg cgtacgtgga agcttgctgc tcgaagggcc
      241 cgtggaattc agaagaggct ggaggaaaaa gaagcgccat ctcttcttgt tgaatgatct
      301 tttggttgtg tctaataata tacacaagaa gaagtttaag ataaaatata tcatcccact
      361 gagttacctc tggatttgtg actatgcaga ccttgtggga ggagacaaca ggactgcctc
      421 caagtccatc ttcctttgct ggcccatgga aaatttcgtg gccaccttct gtaccaagga
      481 acagaaaaaa tggtggtggt ttttcctcca aagatacatc aatgaggcca agatgaatgg
      541 cgagagtaag agtgctgcac tgcagatggt cacagaggac atccgacgct gcaccagcgc
      601 atgcgcctag acatctgctg ctgtctttgc ccaatccaga ggaagactcc catttattcc
      661 ctccaggata aataaaatat tatttgtgtt gagaa
//
