LOCUS       XM_039100400             572 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cysteine-rich perinuclear theca
            protein 1-like (LOC120099282), mRNA.
ACCESSION   XM_039100400
VERSION     XM_039100400.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100400.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..572
                     /gene="LOC120099282"
                     /note="cysteine-rich perinuclear theca protein 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 ESTs, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:120099282"
                     /db_xref="RGD:41338750"
     CDS             42..428
                     /gene="LOC120099282"
                     /codon_start=1
                     /product="cysteine-rich perinuclear theca protein 1-like"
                     /protein_id="XP_038956328.1"
                     /db_xref="GeneID:120099282"
                     /db_xref="RGD:41338750"
                     /translation="MVRVAKKAPKRGAAAAAAAAERSKQKRKSKTSSHQRSKFSNLTQ
                     CTCRRRSETTFFQITEKGEKSLRPATGTKSKKKVKSRIHKEPSETALALLIHERMNEN
                     SNVIPPAEVPPVPESVPVPNEDMASS"
ORIGIN      
        1 ggtgctcaga gctctggggt cagttggtgg aagacctcag gatggtgcgg gtggctaaga
       61 aagcccctaa gcgtggtgct gcagctgcag ctgcagcagc tgaaagatca aagcaaaaga
      121 gaaagagtaa aacttccagt caccagaggt ccaagttttc caacctgact cagtgtacct
      181 gtcggcgcag aagtgaaact acgttctttc agattacgga gaagggagag aaaagtcttc
      241 gtccggctac tgggaccaaa tcgaaaaaaa aggtcaaatc aagaattcac aaagaaccta
      301 gtgagacagc gctggccttg ctcatccatg agcgaatgaa tgaaaattcc aacgtgatac
      361 caccagccga agttccaccg gtccctgaaa gcgtgccggt tcctaatgaa gacatggcca
      421 gttcctagac cccaaatggg tccaaagacc taaaaaacat caatgaatgg ggtctaggag
      481 ctgagccatg gtcatggtgt ccaagataaa ttccaccaca tggcaatagt atgatggtga
      541 caataaaatc aatcagatgt gaaaaatatg ta
//
