LOCUS       XM_039100399             428 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus elongin-C-like (LOC120099279), mRNA.
ACCESSION   XM_039100399
VERSION     XM_039100399.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100399.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..428
                     /gene="LOC120099279"
                     /note="elongin-C-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 20 Proteins, and 89%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:120099279"
                     /db_xref="RGD:41226649"
     CDS             64..402
                     /gene="LOC120099279"
                     /codon_start=1
                     /product="elongin-C-like"
                     /protein_id="XP_038956327.1"
                     /db_xref="GeneID:120099279"
                     /db_xref="RGD:41226649"
                     /translation="MDGEEKTYGGCEGPDAMYVKLISSDSHEFIVKRQHALTSGTIKA
                     MLSGPGQFAENETNEVNYREIPSHVLSKVFMYFIYKVRYTNSSTEIPEFPIAPEIALE
                     LLMAANFLDC"
ORIGIN      
        1 ataggggctg tggcggaaac tagtaagttc ctctgggatc aaatagaatt ttataagaac
       61 ataatggatg gagaggagaa aacctatggt ggctgtgaag gccctgatgc catgtatgtg
      121 aaattaatat cttctgatag tcatgaattt attgtaaaaa gacaacatgc attaacatca
      181 ggaacaataa aggccatgtt gagtggtcca ggtcagtttg cggagaatga aaccaatgag
      241 gtcaactata gagagatccc ttcacatgta ctatcaaaag tgttcatgta ttttatctac
      301 aaggtccgct atactaacag ctccactgaa attcctgaat tcccaattgc acctgaaatt
      361 gcactggaac tgctgatggc cgcaaacttc ctagattgtt aaataaaata aattataata
      421 aaaaaaaa
//
