LOCUS       XM_039100378             693 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus high mobility group protein B4-like
            (LOC120099272), mRNA.
ACCESSION   XM_039100378
VERSION     XM_039100378.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100378.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..693
                     /gene="LOC120099272"
                     /note="high mobility group protein B4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120099272"
                     /db_xref="RGD:41204737"
     CDS             132..638
                     /gene="LOC120099272"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_038956306.1"
                     /db_xref="GeneID:120099272"
                     /db_xref="RGD:41204737"
                     /translation="MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRK
                     CSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYTGPRRERRRRDADAPRKPPSSFLL
                     FSQDHFDEIKEQHPNWTVGQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY
                     YHQCQRGE"
ORIGIN      
        1 gctgggccct ggctgaggcg cacacagagg gaagatttca ccccatggag gacactgtct
       61 aggctgctcc tgtagtgaag accaatcgct gctctccaat cagcaggata ggaattcgag
      121 cttctataaa catgggaaaa gacagcaaag taagaccgaa agtgaacgtc tctccttatg
      181 tccattttat gatggacttc agaaatcaaa tgagggagca acagccaaac atctactatg
      241 actttaccga attttctaga aagtgttctg aaaagtggaa gaccatctca aagaaggaaa
      301 aaaagaagta tgaagccctg gccaagcgcg acaaagatcg gtaccaacgt gaaatgagaa
      361 actataccgg accgagaagg gagaggagga ggagagatgc agatgcaccg cggaagccac
      421 catcctcgtt cctgctcttc tcccaggacc attttgacga gataaaagaa caacacccaa
      481 actggactgt ggggcaggtg gccaaggctg cagggaggat gtgggccagg tgttcagaag
      541 cggataaaat cccctacgag gagagggctg cggttctgag ggccaagtac cttgaagagc
      601 gggaggccta ctaccaccaa tgccagcgcg gggagtaaaa cttcaaggga tggggcaaac
      661 ccagtctgaa acaataaacc tcattcaact ggc
//
