LOCUS       XM_039100304             592 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus high mobility group protein B4-like
            (LOC120099243), mRNA.
ACCESSION   XM_039100304
VERSION     XM_039100304.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100304.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..592
                     /gene="LOC120099243"
                     /note="high mobility group protein B4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins, and 75% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120099243"
                     /db_xref="RGD:41229816"
     CDS             82..588
                     /gene="LOC120099243"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_038956232.1"
                     /db_xref="GeneID:120099243"
                     /db_xref="RGD:41229816"
                     /translation="MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNSYYDFTEFSRK
                     CSEKWRTISEQEKRKYEALAKRDRDRYQREMRNYTGPRRERRRRDPNAPRKPPSSFLL
                     FSMDHFDEIKEQHPNWTVAQVAKAAKRMWSRCSEVDKSHYVEKAAILRAKYLEEREAY
                     YHQCQRGE"
ORIGIN      
        1 gacactgtct aggctgctcc tgtagtgaag accaatcgct gctctccaat cagcaggatc
       61 ggaattcgtg cttctataaa catgggaaaa gacagcaaag taagaccgaa agtgaacgtc
      121 tctccttatg tccattttat gatggacttc agaaatcaaa tgagggagca acagccaaac
      181 agctactatg actttaccga attttctaga aagtgttctg aaaagtggcg gaccatctcg
      241 gagcaggaaa agaggaagta tgaagccctg gccaagcgag acagagatcg gtaccaacgt
      301 gaaatgagaa actacaccgg gccaaggagg gagcgaagaa ggagggatcc gaacgcaccg
      361 cggaagccac catcctcgtt cctgctcttc tccatggacc actttgatga gataaaagaa
      421 caacacccaa actggactgt ggcgcaggtg gccaaggctg ccaaaagaat gtggtccagg
      481 tgttcggaag tggacaaaag tcactatgtg gagaaggctg cgattctgag ggccaagtac
      541 cttgaagagc gggaggccta ctaccaccaa tgccagcgcg gggagtaaaa ct
//
