LOCUS       XM_039100278             716 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ubiquitin-conjugating enzyme E2
            D4-like (LOC120099227), transcript variant X2, mRNA.
ACCESSION   XM_039100278
VERSION     XM_039100278.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100278.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..716
                     /gene="LOC120099227"
                     /note="ubiquitin-conjugating enzyme E2 D4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 66 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:120099227"
                     /db_xref="RGD:41199544"
     CDS             206..673
                     /gene="LOC120099227"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 D4-like"
                     /protein_id="XP_038956206.1"
                     /db_xref="GeneID:120099227"
                     /db_xref="RGD:41199544"
                     /translation="MVHPTLEEMALKRIQKELVAFSQDPPAQCSAGPVAENLFHWQAT
                     IMGPEDSPYQGGVFFLSVHFPSNYPFRPPKVSFITRIYHPNISKNGSICLDILNSEWS
                     PALTISKVLLSICSLLCDPNPDDPLVPEIAKVYRKDLKQYDRMAREWTERYAM"
ORIGIN      
        1 agggaccatg tccagcagca tttctagtgg caggctgccg ggggaacttt agcctctcca
       61 gacagctgta tttcggagca gttgttcagc ccccaggcat cacagccttc cagcaactac
      121 agcagattct ttaacacttg gtctgaatcc acaggaatcc ttgagcccta caggtacacc
      181 taggtgaaca gagccttcag tgaagatggt tcatcctact ttggaagaga tggctcttaa
      241 aagaatccag aaggaattag ttgccttctc tcaagatcca cctgctcagt gttctgcagg
      301 gccagtggca gaaaatttgt ttcattggca agcgaccata atggggcccg aagacagccc
      361 ctaccaggga ggggtttttt ttctgtctgt ccactttccg tccaattacc ccttcaggcc
      421 gcccaaagtt tcattcataa cccgaattta ccatccaaac attagcaaaa atggaagcat
      481 ctgcctagat atcttgaatt ctgaatggtc acctgcactt acaatttcca aagttcttct
      541 ttctatctgc tctctattat gtgatccaaa tcctgatgac cccctggttc ctgaaattgc
      601 aaaggtctat cgcaaggatt taaagcagta tgatagaatg gctcgagagt ggactgagag
      661 atatgcaatg taatttcaat gcaatatggt cataataaaa accattggtc cacttt
//
