LOCUS       XM_039100191            2415 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cancer/testis antigen 55-like
            (LOC120099191), mRNA.
ACCESSION   XM_039100191
VERSION     XM_039100191.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100191.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2415
                     /gene="LOC120099191"
                     /note="cancer/testis antigen 55-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120099191"
                     /db_xref="RGD:41318334"
     CDS             249..968
                     /gene="LOC120099191"
                     /codon_start=1
                     /product="cancer/testis antigen 55-like"
                     /protein_id="XP_038956119.1"
                     /db_xref="GeneID:120099191"
                     /db_xref="RGD:41318334"
                     /translation="MLSLLRWISTFFHGSNTSEEISEEQPQDNTRLKSIQGVVTSLCN
                     YYGWINDSILFNMEVISDNVPLKIGTNVLALVEQDEITHTLKAIKVKVMNDLPEGSEP
                     SKLGRRLCIRCVTSVTEEDVYVTENMSFPLYLFSGAFKPFKGDLVLVEYSMNSGTSNI
                     NIHSVSPLNSQDMNEVYVTSIDGRNGMVEARVFFTLDSLQIPSGYTPGLYDIVDVVAV
                     DSIQQHCSLRAVSMTPVQEEI"
ORIGIN      
        1 cagacaccat tgtctctcat tggctgacca gtgggaaaag gttgcctttg aagcagaggg
       61 agctttatgg gaagctggcg gtaggtgagg aggtaccctg acactggctc tcctaagagc
      121 ttcatcttag cgattcacta ccatcacaca gaggctgggg aacgggggtg taaactaagt
      181 gagacaaagg aagtctgctg aatcatctgt aagcctcgga cactggctgg gctggtggtg
      241 atatcaccat gttgagcctt ctacggtgga tatccacatt ctttcacggg agcaacacgt
      301 ctgaagaaat atcagaggaa cagcctcaag ataacaccag gttgaagtct attcagggag
      361 tggtcacctc tctgtgcaat tactatggct ggatcaatga ctccatcctc ttcaacatgg
      421 aggtaatcag tgacaatgtg cctctgaaga tcgggaccaa tgtccttgcc cttgtggaac
      481 aagatgaaat aactcatacc ctgaaagcaa tcaaggtgaa agttatgaat gatcttcccg
      541 agggcagtga gccatcaaaa cttggcagaa ggctttgtat tagatgtgtc acctctgtaa
      601 ctgaagaaga cgtgtatgtc accgagaaca tgtctttccc attatacctc ttttctggcg
      661 cattcaaacc tttcaaagga gacttggtac tggttgagta ttccatgaat tcaggcacat
      721 caaacataaa tatccactct gtgagccccc tcaactctca ggatatgaat gaggtctatg
      781 ttactagcat tgatggaaga aatggcatgg tggaagccag agtctttttc accctcgact
      841 ctctccagat accttccggg tatacacctg gattatacga cattgtagat gtggtcgctg
      901 tcgacagtat ccagcaacac tgttcactga gggcagtatc aatgacccca gtacaagagg
      961 agatttaacc agacctacaa ttcgctttcc ggcttatgcc caaggttctg gtttagtaaa
     1021 ataatgttgc gtgtaatcca gaaatctgtg aacgaagact ctttctttga aaaccctggt
     1081 aatttcattg gcaacgtgac tcacttcagg aaggtagctt gtcaattcaa aaacataccg
     1141 tgttgaatca tgctttagga aagaaacagc cctgccctca ggtacatgca tcattctcca
     1201 taaagtggag gagattttct gctgcccatg gccttgtagg cctctaagcc tcatgaagag
     1261 gcaaagcatg gtgctcaaga tcccaagagt gtggccaggt aggatttaac attgtagctt
     1321 gccttccatt tgaatgtctt tgatcctttc caaagctaat ttgtttataa aaattttcat
     1381 ttccgatcag aactccattt ggtaaatata ctccttgttt atagagcccc atcctatgat
     1441 agtcttcaat gcagtcagtt cagagaaatg aaagatcata ctacagtcca gttcaaacag
     1501 aaagatagag cagactttca ttagacccag aggtggtggt ccaaaaattg ctttcagatt
     1561 gttgtacttc ctgaagttgg ttgtgtctcc aacattctct ggccttcaga aggaatcctg
     1621 gtcctggcca ccatccaaag agttatggat tcctgcactg gagaccgagg cctcgtgacc
     1681 agttgtttat gtcagttcct tttatggtgt ggtccttcaa ccccaatgac agggttcaat
     1741 tccaaacact tgaggaatac atggttatcc taaactttca tcgttttaac catgtgaaag
     1801 ccacctatct tgcaggcaga cgatgaagat taggaatgtc caccatatac cctttctcct
     1861 gagtgtgacc accccaaccg aacacagagc cccaagcacc aatgtttgtt ttatgttctg
     1921 ccctgccaca caagagtttg ctcatgtcaa agatgctatt gcctcttttg tccactgtag
     1981 gatgatgcca ttattcaggt gaaggcaggt acaggataga actaggcctg tcattggaca
     2041 agaaggaagg atgggcagga gaaaagcttt agaggaggag gagactggag gagagagtag
     2101 ccgagaaaac atggaggcag aggttaagat tcttccctgc acatattgca ggttgttatg
     2161 actaatttta agggatgggt gtgtaaatga ttttgggtaa ctagatgagc aaactatgtc
     2221 ttatctaggt gggcaattat atcttatcaa ttggatcaga gattatggtg ttgtacattc
     2281 ttacatgtgg tgatttaatt gggttcaaga gaatgtgtgg tagttggaca cactgggcct
     2341 ccacggaatt acatatggat gtctggtatg gtggcaacct gtcttgggat gtagatggtg
     2401 ggtacagaga ttgtt
//
