LOCUS       XM_039100167            1263 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus igE-binding protein-like
            (LOC120099179), mRNA.
ACCESSION   XM_039100167
VERSION     XM_039100167.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1263
                     /gene="LOC120099179"
                     /note="igE-binding protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 36% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120099179"
                     /db_xref="RGD:40947923"
     CDS             1..1263
                     /gene="LOC120099179"
                     /codon_start=1
                     /product="igE-binding protein-like"
                     /protein_id="XP_038956095.1"
                     /db_xref="GeneID:120099179"
                     /db_xref="RGD:40947923"
                     /translation="MVFTPQLAGQQLEARLSLFAQLPFTVGEQGRDTNAREVRSPTAP
                     PPYEARSCAFSLVPDRVRRKLQMTFPVFETQEGERVHAPVEYNQIKELAESVRKYGVT
                     ANFTLTILERLALNYLTPADWQMIAKATLVNMAQYMEWKALWYEAAQTQARANATALT
                     PEQREWTFELLTGQGRFAVDQANYHWGAYVQVSSSAIKAWKALTRKGRADNQLTRIIQ
                     GPQEPFSDFVARMTETAGRIFGDAEQAAPLIEQLVYEQATQECRAAIAPRKNKGLQDW
                     LRVCRELGGGPLTDAGLAATILQSRQRPLKGTDTRSCFRCGKIGHLKRDCRITKGDRR
                     PATICVQCGKGYHRPDQCRSVRDIKGKLLPPLEAQLNEMSKNGSLGPQSQGPQRYGNR
                     FQKAMTLAEETPQEVTQNWTCVPPPTSF"
ORIGIN      
        1 atggtgttca cccctcagtt ggccggacag cagctggagg cgcgtctcag tctcttcgcg
       61 cagctcccct ttactgttgg ggagcaggga cgcgatacca acgcccggga agtgcgctcg
      121 ccaaccgcac cccctccgta tgaggcacgc tcttgcgcat tctctttagt tcccgatagg
      181 gtgagaagga agctgcagat gacgttcccg gtctttgaaa cgcaggaggg tgagcgggtt
      241 catgccccag tcgaatataa ccaaataaaa gagctggcgg agtctgtcag aaagtacgga
      301 gttacagcca atttcaccct aaccattctt gaaaggctgg ctctaaatta tttgacaccc
      361 gccgattggc agatgattgc aaaagcgacc cttgtgaaca tggcccaata tatggaatgg
      421 aaagcgcttt ggtatgaggc ggctcaaaca caggccagag ctaatgccac ggcgttaaca
      481 cctgagcagc gagaatggac gtttgaactc ttgacaggac agggtcgctt cgcagtggac
      541 caagctaatt accattgggg cgcttatgtt caagtctcca gctcggccat taaggcctgg
      601 aaggcactca ctaggaaagg cagagccgat aatcaactta ccagaatcat ccaggggccc
      661 caagaaccgt tctcagactt cgtagccaga atgacagaaa ctgctggacg aatatttggt
      721 gatgcggagc aagcagcacc gctcatagaa cagctcgttt acgagcaagc cacccaggaa
      781 tgccgggcgg ctatagcacc cagaaaaaac aaaggattac aggactggct cagagtctgc
      841 agagaactcg gcggcgggcc tcttactgat gcaggcttgg cggccaccat tctccagtcc
      901 cggcaacgcc cccttaaagg gacagataca agatcatgtt ttcgatgtgg aaaaataggc
      961 catttaaaaa gagactgtag gataaccaag ggagacagga ggcctgcaac tatctgtgtc
     1021 caatgtggca agggctacca taggcctgac cagtgccgct cagtgaggga tattaaggga
     1081 aaactactcc ctcccttgga agctcagctt aatgagatgt caaaaaacgg atcgttgggc
     1141 ccccagtccc agggccctca aagatatggg aaccgctttc agaaagccat gaccctggca
     1201 gaggagactc cccaagaggt gacacaaaat tggacctgtg tgccgcctcc gacttctttc
     1261 taa
//
