LOCUS       XM_039100164            4206 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120099175
            (LOC120099175), mRNA.
ACCESSION   XM_039100164
VERSION     XM_039100164.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4206
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4206
                     /gene="LOC120099175"
                     /note="uncharacterized LOC120099175; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 71% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120099175"
                     /db_xref="RGD:41295416"
     CDS             319..4206
                     /gene="LOC120099175"
                     /codon_start=1
                     /product="uncharacterized protein LOC120099175"
                     /protein_id="XP_038956092.1"
                     /db_xref="GeneID:120099175"
                     /db_xref="RGD:41295416"
                     /translation="MGQSLTTPLSLTLDHWKDVRDRADEQGVEIKKGKWQTLCTSEWP
                     TFGAGWPVDGTFNKTVILQVKDQIFHKGLHGHPDQVPYIITWESLAFEPPSWVQPFVD
                     LSWPPTPSAPLAPLSTPSSLFPVRTKKESPKTTSKPKPVLPEDSNSPLIDLLSEEPPP
                     YPVSTRSPQEAEARSSALPEAEPQSEAASSPIAGRLRHKRETVPDSTSQAFPLRQGTG
                     GQTQYWPFSAADIYNWKQHNPPFSKDPVALTELIESVLLTHQPTWDDCQQLLQALLTS
                     EEKQRVFLEARKHVLGDDGRPTQLPDALDDAFPLTRPNWDFNTVDGRGHLRLYRQLLL
                     AGLRGAARRPTNLAQVKQVLQGADETPSAFLERLKEAYRMYTPYDPDDPGQMTSGGQG
                     QEPPPEPRITLEVGGQPVTFLVDTGAQHSVLTRAHGQLSDRTAWVQGATGGKTYRWTT
                     DRRVQLATGKVTHSFLHVPDCPYPLLGRDLLAKLKAQIHFEEGGARITGPQGTPLQVL
                     TLQLEDEYRLYEPGHDKPQTTEIDSWVTKFPLAWAETGGMGLALQQPPLIIQLKATAV
                     PVSIKQYPMSQEAYQGIRPHIRRLLDQGILVPCRSPWNTPLLPVKKPGTGDYRPVQDL
                     REVNKRVEDIHLTVPNPYNLLSTLPPTHTWYTVLDLKDAFFCLRLSPESQPLFAFEWK
                     DPDLGLSGQLTWTRLPQGFKNSPTLFDEALHRDLADFRVQYPSLILLQYVDDLLLAGA
                     TERACRLGTESLLQTLGRLGYRASAKKAQICQTQVTYLGYQLRDGQRWLTSARKQTVA
                     GIPVPKSPRQLREFLGTAGFCRLWIPGYAEMAAPVYPLTKQGTLFQWGSQQQEAFDNI
                     KRALLSSPALGLPDVTKPFELFVDEKKGYAKGVLTQRLGPWKRPVAYLSKKLDPVASG
                     WPPCLRMVAAIALLTKDANKLTLGQPLTILAPHAVEALIKQPPDRWLSNSRMTHYQAM
                     LLNTEKVQFGPVVALNPATLLPLPEGAEPHDCLQILAETHGTRPDLMDQPLPNADYTW
                     YTDGCSYVADGERRAGAAITTEDEVIWASALPAGTSAQRAELIALTQALKMAEGKRLN
                     VYTDSRYAFATAHIHGEIYRRQGLLTSEGREIKNKAEILALLRALFLPKGLSIIYCPG
                     HQKGQSPEARGNRLADASARKAAEKGQILTLVSADDHEQVSPWPYDSEDINLLKKMGA
                     VYSPRLKRWVYKEKIVMPTKLTFELISYLHKLTHLGIKKMRTLLEREEVGLYLLGQGQ
                     ALREATENCKACAQVNPGKDGSRPFPPNMRLQK"
ORIGIN      
        1 gtaaatgctt agttacttgg cttgggtcta gaccgtttgt atttgggcgg gccagagaag
       61 gagctgacga gctcagactt ctcccccgca gccctggaag acgttccaag ggtgtttgga
      121 gcccgatttg tcggagctca gtccgtatca gaaggatacg tagttttggt ggagggtgag
      181 ggatccggac cctcagtgcg tccctccgac tttttacttt caattttgcg ccatagccga
      241 gtggcgcgct tgactgttgc ttgtttgatt gttgggtgtg tttgtcttgt ttgctctcta
      301 atttaccttg aaactaacat gggacagtct ttaacaacgc cgttgagtct tactctcgac
      361 cactggaagg acgtccggga ccgagcagat gaacaagggg tcgaaattaa gaaggggaag
      421 tggcagactc tctgcacttc tgagtggccc acttttggag ccggatggcc ggtggatggt
      481 acttttaaca aaactgttat tttacaggtc aaggatcaga tcttccataa aggactacat
      541 ggacatcctg accaggtgcc ttacattatc acctgggaaa gccttgcctt tgagccccct
      601 tcttgggtgc aaccatttgt agatttaagc tggcccccta ctccctcggc cccacttgct
      661 cctctctcaa ccccttcctc tctctttcct gtccggacca agaaggaatc tcctaaaact
      721 acatctaaac ctaagccggt gcttccggaa gattctaact ctccccttat agatctctta
      781 tctgaggagc ctcctccata ccctgtatct accaggtcac ctcaggaggc agaagcaaga
      841 tcgtctgccc tcccagaagc tgaaccccag tctgaggcag cgtcttctcc aatagcaggg
      901 agactacgcc ataagcggga aacagtaccg gattcgactt cgcaggcctt tccccttaga
      961 cagggaacgg gagggcagac ccagtattgg cctttctccg cggccgatat ttacaactgg
     1021 aagcagcaca accccccttt ttccaaggac ccagtggccc ttactgaatt aatagaatct
     1081 gttttactta cacatcagcc cacttgggat gattgtcagc agcttttaca ggcccttttg
     1141 acttcggagg agaaacagag ggtgtttctg gaagccagga agcatgtcct gggggatgat
     1201 gggcgtccta ctcaactgcc tgatgcactt gatgatgcat ttccactcac aaggccaaac
     1261 tgggacttca atacggttga tggtagggga cacctacgcc tttaccgcca gttgctttta
     1321 gcgggtctcc gaggggctgc ccggcgccca accaatttgg ctcaggtgaa gcaggtatta
     1381 cagggggccg atgagacccc ctcagctttc ttagaaagac taaaagaggc ctatcgcatg
     1441 tacacaccct atgatccaga tgacccaggg cagatgacga gtggaggtca gggccaggag
     1501 cccccccctg agcccaggat aactcttgaa gtaggggggc agcccgttac ctttctagtg
     1561 gacactggag ctcaacattc agtcctcacc cgggctcatg gacagctcag tgaccgtaca
     1621 gcctgggtgc aaggagccac tggtggcaag acatatcgat ggacaacaga ccgccgggtt
     1681 cagctggcta ctggtaaggt gactcattct tttctacatg ttccggattg tccataccct
     1741 ctactgggcc gtgacttgct cgctaaacta aaagcacaaa ttcattttga agaaggaggg
     1801 gcccggataa ctggtcccca ggggacccct ctccaagttt tgacccttca attagaggac
     1861 gaatatagat tatatgaacc gggacatgac aagccacaaa ctacagaaat agactcttgg
     1921 gtcacgaagt tcccactagc atgggcagag actgggggaa tgggactagc gcttcagcag
     1981 cctcctttga ttattcaact aaaggccacg gcagttccag tttctataaa gcagtatccc
     2041 atgtcacagg aggcctacca gggaataaga ccacatatta gaaggcttct agaccagggc
     2101 attttagtcc cttgccggtc gccatggaat acgcccttgc tacctgtcaa aaagccagga
     2161 actggagatt accggccagt acaagattta agggaggtca ataaaagggt agaagacatc
     2221 catctgactg tcccaaaccc ttacaactta ctcagtactc tgccccccac acatacttgg
     2281 tatacggttt tggacctgaa agatgctttc ttttgtctcc ggcttagccc ggaaagccaa
     2341 cctttatttg cttttgaatg gaaagatcca gatttgggac tttcgggtca attgacttgg
     2401 actagactgc cccagggatt taaaaatagt cccactctgt ttgatgaagc tttacatcga
     2461 gatttggctg attttcgagt ccagtacccc tctcttatac tcctgcaata tgttgatgac
     2521 ctgcttttgg caggtgccac tgagagggca tgccgtttgg ggacagaatc cctcctacag
     2581 actctggggc gcctgggcta tagggcctca gcgaaaaagg cccaaatatg tcaaactcaa
     2641 gtcacttatc tgggatatca gctgagagat ggacagaggt ggttaacctc agctcgaaaa
     2701 cagactgtgg ctggcatccc ggttccaaaa agcccccgtc agctgaggga gttcttaggc
     2761 acggcaggat tctgccgcct ctggatcccg ggttacgccg agatggctgc tcccgtatac
     2821 ccgcttacta aacaagggac attgttccaa tgggggtcac aacaacaaga ggcttttgac
     2881 aacatcaagc gtgccttatt gtcctcccct gcccttggcc tcccagatgt taccaagcct
     2941 ttcgagctgt ttgtagatga gaagaaaggc tatgcaaaag gagttcttac acaaagacta
     3001 gggccctgga agcggccagt ggcctattta tcaaagaagt tagaccccgt tgcttcagga
     3061 tggccacctt gcctgaggat ggtagcagca attgcactcc tgactaagga tgctaataaa
     3121 ctgaccctag gacagcctct gactattttg gcacctcatg cggtagaggc cctgataaaa
     3181 caacctcctg accgatggct ctctaattcc cgcatgactc attaccaagc tatgttgtta
     3241 aacacggaga aggtccagtt tggtccagta gtggctttga atccggctac cctactcccc
     3301 ttaccggaag gagctgagcc acatgactgc ctgcagatct tagcagaaac acatggaacc
     3361 agaccagatc taatggacca gcctcttccg aatgctgact acacctggta tacggatggc
     3421 tgcagttatg ttgcggatgg ggagcggagg gccggagctg ccatcaccac cgaagatgag
     3481 gtaatctggg caagtgcctt acctgcaggt acctccgctc aacgagccga gctcattgcc
     3541 ttgacacagg ctcttaagat ggcagaaggt aagagactaa atgtatatac tgacagccgt
     3601 tatgcatttg ctaccgcaca tattcatggt gaaatctatc ggagacaggg attacttaca
     3661 tcagaaggaa gagagatcaa aaataaggct gaaatcttag ctctcttgag ggctctattc
     3721 ctaccaaaag gactgagtat catatattgt ccagggcacc agaaaggaca gagtccagaa
     3781 gcccggggaa accggctggc cgacgcttcg gctcgaaagg ctgcggagaa aggacagatc
     3841 ctgactctgg tcagtgcaga tgaccatgag caagtttccc catggccata tgattcagag
     3901 gacataaacc tcctaaagaa aatgggggca gtatactctc ctcgactaaa aagatgggtc
     3961 tataaagaaa agattgtcat gcctacaaaa ttgacttttg aattaatatc ttatttacat
     4021 aaactaactc acctgggaat caagaagatg agaactctcc tggagcgaga ggaagtaggt
     4081 ctttaccttt tgggacaggg tcaggccttg cgagaagcga ctgaaaactg taaagcttgt
     4141 gcccaagtga acccagggaa ggatgggtcg aggcctttcc caccaaacat gagactgcaa
     4201 aagtag
//
