LOCUS       XM_039100161            1316 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus proline-rich extensin-like protein
            EPR1 (LOC120099168), mRNA.
ACCESSION   XM_039100161
VERSION     XM_039100161.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1316
                     /gene="LOC120099168"
                     /note="proline-rich extensin-like protein EPR1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 76% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120099168"
                     /db_xref="RGD:40970234"
     CDS             78..1316
                     /gene="LOC120099168"
                     /codon_start=1
                     /product="proline-rich extensin-like protein EPR1"
                     /protein_id="XP_038956089.1"
                     /db_xref="GeneID:120099168"
                     /db_xref="RGD:40970234"
                     /translation="MEHENTNYPPHVGPEEEKQKGAKAQMILPAGEGRNGEESERSSP
                     GQEASATKWGEVEELGERDRTGSDGENLSAVGTSGIRNDWDKEGASSSRQKNESRPQK
                     PVPECRWGMEDVQPVPVLIPRVQRIQLVQSRVQSVPLKVPVVRPVPIPALSVQPIPIS
                     VPKVQPMPITVPQVQAIPPAVPPAQPVPTTVSQDPTGPIPEPHVQPVPVTAPPPQPVP
                     LTTPPPQPVPVTAPPPQGMSIRVPHVQPVPVTAPPSQAMPIRVPHVQPVPVTTPPSQA
                     MPIRVPHVQPVPVSAPLSQAMPIRVPHVQPVPVSAPLSQAMPIRVPHTAPGTSCDIYC
                     SPPTDYANNSAPCTACASYCSPTTDYANQSAPCTACASYCSPTTDYANQSAPCTVCVT
                     YCSPITACASYCSPTTDYAN"
ORIGIN      
        1 tctagggggc tccagctcag aatctgaaga agctcaaggg actgcggagc tcaagcgcct
       61 ttgatgggat ccaggtcatg gagcatgaaa acaccaacta cccaccccat gtgggacctg
      121 aggaggaaaa gcaaaagggt gcgaaagcac agatgatctt gcccgctgga gagggaagaa
      181 atggggaaga gagtgaacgg tcgtcccctg ggcaggaggc ttcagcaaca aaatggggag
      241 aagtagaaga actgggagaa agggacagaa cggggagtga tggagaaaat ctttctgctg
      301 taggaacttc aggcatcagg aatgactggg acaaagaggg tgccagcagc agtaggcaga
      361 agaatgagag tcggcctcag aagccagtcc ctgagtgtag gtggggcatg gaggatgtac
      421 agccagtgcc agtactgatt ccccgtgtac aacggataca acttgtgcaa tcccgggtac
      481 agtcggtgcc cctaaaggta cctgttgtac ggcctgtgcc cattcctgcg ctcagtgtac
      541 agcctatacc aatcagtgtg cccaaggtcc agcctatgcc cattactgtg ccccaagtac
      601 aggctatacc acctgctgtg cccccagcac agcctgtgcc aaccactgtg tcccaggacc
      661 ccactgggcc cattcctgag ccccatgtac aacctgtgcc agttactgct cccccaccac
      721 agcctgtgcc acttactact cccccaccac agcctgtgcc agttactgct cccccaccac
      781 agggtatgtc aatcagagtg ccccatgtac agcctgtgcc agttactgct cccccatcac
      841 aggctatgcc aatcagagtg ccccatgtac agcctgtgcc agttactact cccccatcac
      901 aggctatgcc tatccgagtg ccccatgtac agcctgtgcc agtttctgct cctctatcac
      961 aggctatgcc tatccgagtg ccccatgtac agcctgtgcc agtttctgct cctctatcac
     1021 aggctatgcc tatccgagtg ccccatactg ccccaggtac atcctgtgac atttactgct
     1081 cccccccaac agactatgcc aataacagtg ccccatgtac agcctgtgcc agttactgct
     1141 cccccaccac agactatgcc aatcagagtg ccccatgtac agcctgtgcc agttactgct
     1201 cccccaccac agactatgcc aatcagagtg ccccatgtac agtctgtgtc acttattgct
     1261 cccccatcac agcctgtgcc agttactgct cccccaccac agattatgcc aattag
//
