LOCUS       XM_039100160            1739 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120099165
            (LOC120099165), mRNA.
ACCESSION   XM_039100160
VERSION     XM_039100160.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1739
                     /gene="LOC120099165"
                     /note="uncharacterized LOC120099165; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 1 long SRA read, 1 Protein, and 77% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120099165"
                     /db_xref="RGD:40954503"
     CDS             1..873
                     /gene="LOC120099165"
                     /codon_start=1
                     /product="uncharacterized protein LOC120099165"
                     /protein_id="XP_038956088.1"
                     /db_xref="GeneID:120099165"
                     /db_xref="RGD:40954503"
                     /translation="MVRKCWAQARILRWTALQVPFPDWGALGEVRRALRGGGSTPRSC
                     ARIAAARLPGYHRDAFPLALPGGVETAVPTALARGRGGRRRAERGVAGERLAEDGRLP
                     TAPRGLCPASHAQPRIAGLLLKLALLIFFFLRCPTLADSKRLQKELLALQNDPPPGMT
                     LNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQKTGPRRSQCNRS
                     VSALSACFPAAKKRDDHQIIPFMCEHVTRIQRKQNGGIMMILVDATVLILVAEDSPTE
                     KMSTLIIQSLNFNI"
ORIGIN      
        1 atggtaagaa agtgttgggc ccaggccaga atcttgagat ggactgcctt acaggtccca
       61 tttccagact ggggagctct gggcgaagtt cggcgtgcgc tccgcggtgg aggctccact
      121 ccgcgctcct gcgcgaggat cgctgccgct cggctccccg gataccacag ggatgctttt
      181 cccctcgcgc tccctggcgg ggtggaaaca gctgtgccca ctgccctcgc ccgcggtcgg
      241 ggaggccgga gacgggcaga gcgtggggta gccggagagc gcctcgccga ggacggccgc
      301 ctgcccacgg cgccccgcgg cctctgcccg gcctcccacg cgcagcctcg gatcgctggg
      361 ctcctgctca aactcgccct cttaattttt tttttcttac gatgccccac ccttgcggac
      421 tcgaaacgac tacaaaaaga actgttggct ttgcagaatg acccacctcc tggaatgact
      481 ttaaatgaaa agagcgttca gaattcaatc acccagtgga tcgtagacat ggaaggtgca
      541 ccaggaacct tatatgaagg ggaaaaattt caacttctgt ttaaatttag tagtcgatac
      601 ccttttgact ctcctcagaa gactggtccc cggcgctctc agtgcaatcg gtctgtctca
      661 gcattatcag catgctttcc agctgcaaag aaaagagacg accaccagat aattcctttt
      721 atgtgcgaac atgtaacaag aatccaaaga aaacaaaatg gtggtatcat gatgatactt
      781 gttgatgcca ctgttctcat cctcgtagca gaagatagtc ctactgagaa aatgagcact
      841 ttgatcattc agtctttgaa ctttaacatt tgactggaag tgacctatag gcaatgaaga
      901 ctacttcctt ttactgcatt tttactcgtg tgcattctgg gcgcatgttg atcgctggtt
      961 cagtccaggc aactgacatg cttttataag tcatacagta ttaatgcagg tgtcaggaaa
     1021 tgtcaaatat aattccattt ttttattttt atttttttaa gcttttggaa aagttccagg
     1081 tcctcatgta ttgtgcaata acagtgactt cctcagtggt ttgggggcgt tcattgccgg
     1141 caatggacgt tgtgaaagag tgagttttct taactcctgc cactcagtga ttaatgcatg
     1201 atagggcctc tgaaatgaat ttaccgatta ttgtgggatt ataaggaaag tgagggatcc
     1261 aatgttatat tgaaagacac cccagctgtt gatattggat tctatgcact gtgatcctaa
     1321 ggctaacagc atgaaaacat gcatctttaa aggaccgtga gaaagatcat tgcatattta
     1381 tttaattgtt tatatctgct gtcaaattgt tttgacatgg aaagttttcg aggaacattg
     1441 gcagagaggt acaatatgtt atccctatgg tgaaaataaa ttcatttatt gtatataatc
     1501 ctcaatctct gaagtaaagg tgtgaataat agggtatgaa tggtttaact aaggctttgt
     1561 tttggaagta aaaaaatagc agtgatgatt aaattactgc catccatcat ttgggcctgt
     1621 tattattttc caagtatatg acactcttac ttcctgctag ccatcagcat gagccctgtt
     1681 acctaaacac tattcatcta tttatgtttg gaaaaatcca taaacatttt tgtttgtaa
//
