LOCUS       XM_039100151            2853 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus fibronectin type III domain containing
            protein 3C1-like (LOC120099144), mRNA.
ACCESSION   XM_039100151
VERSION     XM_039100151.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086039) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2853
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2853
                     /gene="LOC120099144"
                     /note="fibronectin type III domain containing protein
                     3C1-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 1 long SRA read, 1 Protein"
                     /db_xref="GeneID:120099144"
                     /db_xref="RGD:41114929"
     CDS             1..2853
                     /gene="LOC120099144"
                     /codon_start=1
                     /product="fibronectin type III domain containing protein
                     3C1-like"
                     /protein_id="XP_038956079.1"
                     /db_xref="GeneID:120099144"
                     /db_xref="RGD:41114929"
                     /translation="MADNIPDTNTTDRNTSSSGRATSIPTLNAGFYTDINNNIIGPSI
                     STYNVVTTDETHEPPDTKSIPSYTSESACNALITENAQTCSSIKDGLRPSGAATTSEE
                     NRGKTETNMGAGVNKQISGEKQKKRQSSNASLRGHNTKYGTKPCFFNIEKPVVSNIQT
                     RSATVSWTLNNTEKYDINLPMTFELALSSSGKNRIYKHIYTGDGVTVVLHDLQPCTVY
                     FLRVAIIRDGEHRNVSEVVSFTTPGCEPDPPLAPTLISRTKNSLNLQWKGCNDNGSKI
                     SHFLLEWDEGIGEDFKSCYTGPRKQHKLFKLSPSTKYSFRLAAKNHFGCSNFSETAVF
                     YTSENTPSAPLPPKLKEAGVYSLSLEWCAPTNPNPNDTLTYVLEMKEAKSGLGFKPKY
                     NGEDLSCTVKNLQRNTTYKFRIFAYNLEGRSNPSGEVKYTTRPARPGCPNKPHVVGTI
                     HARQVTIGWDLPKDNGEMKISSYSLEVCENSDAGNLWKIIYSGTLQEFLYDDLQPGTT
                     YKLRVFCTSPAGQSRPSDVLTIQTPALPPESCSSQPLHSKTKGRDVNLLDNRSVNGKS
                     EAPVRGKKAKGTHHDKKECPSSEKTCAAVNIVGVGMFGGTAKVTTPGTVPAMVPMLQE
                     VENKVPAKQSSTCIAIRWEEPDCHGSQITGYNIEYGDKKIVTVKRVTEYVLKNLQPNT
                     TYRIRIQAINHYGLSPFSPSIRCKTKPLPPEPPQLNCVVYGHQSLRLKWGTVSSKKSR
                     AIFISYNLLMEDRSGRFSVIYRGTDVTHKVQKLTEYTQYKFKIQACNEAGEGPESDIY
                     TFTTTKSPPTALKAPKVHPLNNNCCEIKWETLEPIKGDPIVYCLQVNTGKKAHQIYKG
                     PNTSFSFSNYDANSRYRFKVCAGRQYETFNGLQELWGPYSPSALFSTYKHHSGHDKGS
                     GGKGKGNHSEKGEKCKVGFALIAVLCAVAIQFFSFI"
ORIGIN      
        1 atggctgaca atattccaga cactaacact actgacagaa acacgagttc ttctggtcgt
       61 gccacaagta ttcctacttt aaatgctggt ttttacactg acatcaataa caatatcata
      121 ggcccttcca taagtactta caatgtagtc accactgatg aaactcacga accaccagat
      181 actaagagta ttccgagcta tacttctgag agtgcttgca atgctctcat cactgaaaat
      241 gctcagacct gctcctcaat taaagatggt ctcagaccat ctggtgcagc aaccacttct
      301 gaagaaaatc gtggaaagac agagactaac atgggagctg gagtcaataa gcagatatca
      361 ggtgaaaagc aaaagaagag acagtcatca aatgcatcac tgagaggaca caatacaaaa
      421 tatggaacaa agccatgttt tttcaacatt gaaaaacctg tggtttctaa tattcaaaca
      481 cgatcagcta cagtgtcatg gactctgaac aatactgaaa aatatgatat taatcttcct
      541 atgacatttg aattggcact gtccagcagt ggtaaaaaca gaatctataa acacatttat
      601 actggtgatg gcgttactgt ggtcctacat gatctacagc cttgcacggt ctacttctta
      661 agagttgcaa tcataagaga tggagaacac agaaatgtgt ctgaagtggt tagcttcaca
      721 acaccaggct gtgaaccaga ccctcctctt gcacccacac tgattagcag aaccaagaac
      781 agcctgaact tacaatggaa aggttgcaat gataatggat ccaaaataag ccactttcta
      841 ttggaatggg atgagggcat aggtgaagac ttcaaaagct gttacactgg gcccaggaaa
      901 cagcacaagc tctttaaact gagcccatcg acaaaatatt ccttcagatt ggctgccaaa
      961 aatcacttcg gctgcagtaa tttcagtgaa acagcagtct tctatacgtc ggaaaacacg
     1021 ccttcagcac ctctgccacc taagttgaaa gaggcaggag tctacagttt gtctctagaa
     1081 tggtgtgccc caacaaaccc aaaccctaat gataccctta cttatgtgct agagatgaag
     1141 gaagcaaagt ctggattagg ttttaaacct aaatacaatg gagaggacct ctcttgcacc
     1201 gtgaaaaatc ttcagagaaa tactacatac aagtttcgga tttttgccta caatctggaa
     1261 ggaaggagca accccagtgg agaagtaaaa tatactaccc gtccagctag gcctggatgc
     1321 cctaataaac cacacgtagt gggaacgatc catgcccgcc aagtgacaat tggatgggat
     1381 ttaccaaaag ataatggtga aatgaaaatt tcaagttaca gtttagaagt ttgtgaaaat
     1441 tcagatgctg ggaatctctg gaaaataatc tacagtggca cactgcagga attcctgtac
     1501 gatgacctcc aaccaggcac cacttataaa cttagggtct tttgcacttc acctgcaggc
     1561 caaagccgtc cttcagatgt attgacaatt cagacacctg ctcttcctcc tgagtcttgc
     1621 agttcgcagc ccttacatag taaaaccaag ggaagggatg tcaaccttct tgacaatcgt
     1681 tctgttaatg ggaagtctga agcacctgtg cgaggcaaaa aagcaaaagg tactcatcat
     1741 gacaaaaagg agtgccccag ctctgaaaag acatgtgcag ctgtaaatat agttggggtt
     1801 ggaatgtttg gaggaactgc aaaagtgaca acacctggaa cggtaccagc aatggttcca
     1861 atgttacaag aagttgaaaa caaagtgcct gccaagcagt catcaacttg catagctatc
     1921 cggtgggagg agccagactg ccatggctct cagatcactg gatataacat tgaatatgga
     1981 gataaaaaaa tcgtgactgt caaaagggta accgagtatg ttctgaaaaa tctacaacct
     2041 aatactacat accgaatcag aattcaagct atcaatcatt atggactaag cccttttagc
     2101 ccatcaataa gatgcaaaac caaaccactg ccaccagagc ctccacagct taattgtgtg
     2161 gtctatggac accagagtct cagactcaaa tggggcacag tctccagcaa aaagtcacgt
     2221 gcgatcttta tcagctacaa cttactaatg gaagaccgat ctggcaggtt ttctgtcatt
     2281 taccgtggga cagatgtgac tcacaaagtg caaaaactga ctgaatatac acaatacaag
     2341 tttaaaatcc aggcgtgtaa tgaagctggg gaaggaccag agtctgacat ctacactttc
     2401 actacaacca agtccccacc aactgcactt aaagcaccca aagtacatcc actgaataac
     2461 aactgttgcg agatcaaatg ggagacttta gaaccaatta aaggtgaccc cattgtgtac
     2521 tgtcttcaag tcaacaccgg aaaaaaggct catcagattt acaaaggacc aaacacttcc
     2581 ttttcctttt cgaactatga tgcaaattca cgctaccgct tcaaggtctg tgcaggacgc
     2641 caatatgaaa ccttcaatgg tctccaagag ctgtgggggc catatagccc cagtgctctg
     2701 ttctcgacct ataagcatca ctcagggcat gacaaaggca gtgggggtaa aggaaaaggc
     2761 aaccacagtg agaaagggga aaagtgcaag gtagggtttg cacttattgc tgttttgtgt
     2821 gctgttgcaa ttcagttctt ctcgttcatc tag
//
