LOCUS       XM_039100146            1290 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus igE-binding protein-like
            (LOC120099136), mRNA.
ACCESSION   XM_039100146
VERSION     XM_039100146.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1290
                     /gene="LOC120099136"
                     /note="igE-binding protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 78% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120099136"
                     /db_xref="RGD:41058808"
     CDS             1..1290
                     /gene="LOC120099136"
                     /codon_start=1
                     /product="igE-binding protein-like"
                     /protein_id="XP_038956074.1"
                     /db_xref="GeneID:120099136"
                     /db_xref="RGD:41058808"
                     /translation="MDMGSDNSENGILDSEEEAELDEEAARYEEEKYHPEEQKKGNKK
                     LLPRQSPTAPPPYEARSCAFSLVPDRVRRKLRMTFPVFETQEGERVHAPVEYNQIKEL
                     AESVRRYGVTANFTLTILERLALNYLTPADWQMIAKATLVNMGQYMEWKALWYEAAQT
                     QARANATALTPEQREWTFELLTGQGRFAVDQANYHWGAYIQVSSSAIKAWKALTRKGG
                     ADNQLTRIIQGPQEPFSDFVARMTETAGRIFGDAEQAAPLIEQLVYEQATQECWAAIA
                     PRKNKGLQGWLRVCRELGGPLTNAGLAAAILQSRQRPLKGTDTRSCFRCGKMGHLKRD
                     CRITKGDRRPATICARCGKGYHRPDQCRSVRDIKGKLLPPLEAQPNEMSKNGSLGPRS
                     QGPQRYGNRFQKAMTLTEETPQEVTQNWTCVPPPTSF"
ORIGIN      
        1 atggatatgg gttctgataa ctctgagaat ggaatcttag attcagagga ggaggccgag
       61 ttagatgagg aagcagctag atatgaggaa gagaaatatc accccgagga acaaaagaaa
      121 ggtaataaaa agcttctgcc acggcagtcg ccaaccgcac cccctccgta tgaggcgcgc
      181 tcttgcgcat tctctttagt ccccgatagg gtgagaagga agctgcggat gacattcccg
      241 gtctttgaaa cccaggaggg tgagcgggtt catgccccag tcgaatataa ccaaataaaa
      301 gagctggcgg agtctgtcag aaggtacgga gttacagcca atttcaccct aaccattctt
      361 gaaaggctgg ccctaaatta tttgacaccc gccgattggc agatgattgc aaaagcgacc
      421 cttgtgaaca tgggccaata tatggaatgg aaagcgcttt ggtatgaggc ggctcaaaca
      481 caggccagag ctaatgccac ggcgttaacg cctgagcagc gagaatggac gtttgaactc
      541 ttgacaggac aaggtcgctt cgcagtggac caagctaatt accattgggg tgcttatatt
      601 caagtctcca gctcggccat taaggcctgg aaggcactca ctaggaaagg cggggccgat
      661 aatcaactta ctcgtatcat ccagggacct caggaaccat tctcagactt cgtagccaga
      721 atgacagaaa ctgctggacg aatatttggt gatgcggagc aagcagcacc gctcatagaa
      781 cagctcgttt acgagcaagc cacccaggaa tgctgggcgg ctatagcacc cagaaaaaac
      841 aaaggattac agggctggct cagagtctgc agagaactcg gcgggcctct tactaatgca
      901 ggcttggcgg ccgccattct ccagtcccgg caacgccccc ttaaagggac agatacaaga
      961 tcatgttttc gatgtggaaa aatgggccat ttaaaaagag actgtaggat aaccaaggga
     1021 gacaggaggc ctgcaactat ctgtgcccga tgtggcaagg gctaccatag gcctgaccag
     1081 tgccgctcag tgagggatat taagggaaaa ctactccctc ccttggaagc tcagcctaat
     1141 gagatgtcaa aaaacggatc gttgggcccc cggtcccagg gccctcaaag atatgggaac
     1201 cgctttcaga aagccatgac cctgacagag gagactcccc aagaggtgac acaaaattgg
     1261 acctgtgtgc cgcctccgac ttctttctaa
//
