LOCUS       XM_039099463            4092 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus rho GTPase-activating protein 20-like
            (LOC120099102), transcript variant X1, mRNA.
ACCESSION   XM_039099463
VERSION     XM_039099463.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4092
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4092
                     /gene="LOC120099102"
                     /note="rho GTPase-activating protein 20-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 8 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120099102"
                     /db_xref="RGD:41270053"
     CDS             3269..3910
                     /gene="LOC120099102"
                     /codon_start=1
                     /product="rho GTPase-activating protein 20-like"
                     /protein_id="XP_038955391.1"
                     /db_xref="GeneID:120099102"
                     /db_xref="RGD:41270053"
                     /translation="MYIDHYYFCLFSIKKDFIINIDGSLLTLDFYENWLIIPDGTLAG
                     KINAIQSLLQQIPEPNFILLKHLICVLVIIKDSSMNNLDSYRLFLSIDPHVLWGQTSR
                     DSLFGSDVLRKMSLIQIMIDNYDQIFGNDDIFSKHIDKRSEDLKTYKESINYSGKSPI
                     MTKAIAGYNWKTNDIDEKFNISYAALQEKSPTGYVVHNCRERTRIRSHIQNST"
ORIGIN      
        1 ccgagaaagg gaataacact cgaaatgtaa ataagaaata ctcaagttaa taaaaaaaaa
       61 aagagagaga gaaagactat atggcaatta aggcataatg ctgatgctgt atatattata
      121 tgtgtgtata tatatatgtg tgtgtatata tatatatata tatatatata tatatatata
      181 cccctgtcac tatgtgcccc agcaatacat atattttatg atgttgatat aaattctaaa
      241 ataaaagttt gatttttaca cacacacaca gagaaaaagc cagagtcttg ttatcgttgt
      301 tgttgttttt taatgcgttg tgaaaaagat gcagcctatt ctagcaggat aaatattgtt
      361 aaccatttca ctttgagttc atgaaggctc acaaatgagc aacactcctc attgaggaaa
      421 acaaaaagct attgtcgaca aggacagctc acacacacac aagcaaaaag aactgtgtaa
      481 aaataactaa ctgttcccat attaaacgtt gaccactgag gagatgcctg gggaggttca
      541 ctgtcagaat attcaaacac ttgggcaccc tctagaggaa caacttgaaa accttccaaa
      601 cttcatttgg agagattcac tgtcagaata ttcaagcact tgggcaccct ctagaggaac
      661 aacttgaaaa ccttcaaaac ttcatttgga aataagaaaa atctgatttt acctaagcta
      721 tgaaatttta agctcagaag taccacttgg acattttaat ttggaaacct ctccagaagg
      781 tgtcttgctc taaagcaccc aggaaatggg cgcagccact gtctttgcta ctgttccagt
      841 cttttctgta cagcaacaca gggacaatca tctccagttt cttaactgca gtaaactgta
      901 agcactgcta cagtgtggga cagctagctt tcctccagtt cttaacattt gaatgcctgt
      961 atcatcgctc atctttggcc cttcttcctc tctccttcct gtccttctat ttgtctgtgc
     1021 tagacaaggt tctgccatta gactgtcacc ccatatctga gtttcttttc ataggattaa
     1081 gtcaccaaat catataaagt gacatctcct gagatgacag cttgtttcca tgtcacttcc
     1141 ttatggctgt tcttttgaga aaggttctca atgcacagcc cagacttaac acaacctaga
     1201 gaccctcatg cctctgactc ccataccaca tcgctttcat ctgaaatgag attaaaagct
     1261 caagtttcaa cttttgtccc cagtcctggg agctttctct cttgaagaag atctgatatt
     1321 tagtgggcca gcgttgattt gaatcagttt gactttgggt tggtaaaaat tttcactgag
     1381 ttcatggact tcatttcttc tctttgagag tctctgagaa cctggttctt atattgttct
     1441 tcagggccca agaggccaga gattagaagt acaccaaagg tgaagattct agtaagaaac
     1501 cttgtcccat aaactcaggc cttaaagaga atgctaagga tgacttagaa gtaaaggcaa
     1561 tgtattttta cactctgttc atggggagaa taaaaatcag taagatagac agaaagagga
     1621 cactaaagaa aacagagacc tgcccatgag accttacagg tatctgttgt ttggggttct
     1681 ctatgagctt gtagccccaa catcatctca cctggatgtt ctactagcat catgcctggt
     1741 tgagtttaca gttgtttaag atcagacata ctaccagtgt cgtagtcaat gttctattgc
     1801 tatgaagaga caccgtgacc atgacaacac ttacagagga aaatttttaa ttggtactgg
     1861 cttaacattt tcaggggtct agtctattat tgtcatgggg ggggtgggaa gacaggaagc
     1921 catggtacca gagagatagc tgagatttct acattccaat cagcaggcag caggaaggga
     1981 gcaaagacat tgggcctagc ttgaccattg ttagattctc tttttgatca ccaagaaaca
     2041 aatagattta ggtctgtgga gatttccagg caaatatggt ggttaggccc tgtaattcta
     2101 acaacctgga gacagagaat aagtcatggt gaagaccaac ttcagtccag agtgagaccc
     2161 tgtctcaaaa aaaaaaaaaa aaaaaaccac aaagaaaaac aaaaaaagaa gagcctgaag
     2221 aaatgtacca caccttgatt acataacctt ctggataccc tgagagatta ctggggtcag
     2281 gctagttgga caataaatct taacagtgag cagcactgat caattaatag gccttgactg
     2341 tatataaaga gaaagggggt ggagcataag tattcattgc tctctgcatt ctcagagagg
     2401 ataatatgta gacagctgct caacctgcca tggtggacga tggcctctaa ttgttggcca
     2461 acatacacca cttcattaag ttgattctcg ggcatgtgat ttagtaaagg ggaaggaact
     2521 catgtggtaa gacatctaca aatccgtgtg aacaggcagg catgttaaaa atagggaaag
     2581 ggtccagagg aagcttcata aacaagaaaa tctccaaatt gcagtcttta agtatactgt
     2641 atgtacaaca ccaacattaa catgtaaaac agatttcaag gagagacatt ctagtcatgg
     2701 tggcacatgt gtgtaatccc gacactggga agatgaagca ggaggatctc tgtgagtttg
     2761 ggtcagccag gactacataa aatgggaagt ggagtggaga tctatgattg caaggagtgt
     2821 tgtagtctag aagccaggag aggcaatttg aacagaccgt aggtttactt cattgctata
     2881 gcaactagga ctctacttca ttggttctag tcttagggaa gaagaaaaat aagatcctgc
     2941 atataggttc caattttgag ccaagattct ggagccatga cagtttggga atcttttagg
     3001 gaagtacgat ctcaaccaat gattctcagc ctccctaatc ctgtaacact aatatatttt
     3061 ctcatggctt tgtgactctt aaccattact tcattttgct tcccttcata attcaaattt
     3121 tgctcctgat ttgattataa agaaaaatgg atggaatatc tgatatggaa aatatatgtg
     3181 accctgtatt gattatgacc cacaagttga gaatcgcttg tctaaactgc taattttaaa
     3241 caaaaatgtt tttcaagtac tttctacaat gtacattgac cattactatt tttgtttatt
     3301 ttcaataaaa aaggatttta ttattaacat cgatggaagc ttactaacct tggattttta
     3361 tgaaaattgg cttatcatcc cagatggaac tctggctgga aaaattaatg ccattcaaag
     3421 cctcttgcaa cagatcccag aaccaaactt tatactatta aaacatctca tatgtgtatt
     3481 agtaataata aaagattctt ccatgaataa tttagacagt tacaggttat ttctgagcat
     3541 agatccacat gtactgtggg gtcagacttc aagagattca ttatttggga gtgatgtctt
     3601 aagaaagatg tctcttatac aaattatgat tgacaactat gatcaaatat ttggaaatga
     3661 tgatatattt agtaaacaca ttgacaaaag gtctgaagac ttaaagacat acaaagaatc
     3721 aataaattat tctggaaaat ctcctattat gacaaaagcc atagctggct acaactggaa
     3781 aaccaatgat attgatgaaa aatttaatat ttcatatgct gcactgcagg aaaaaagtcc
     3841 tacaggatat gtcgtccata attgcaggga aaggacgaga atcagatcac atattcaaaa
     3901 ttctacctga aaattcacac tggtgcctca gagagaggat tgacagtgaa caactcattg
     3961 aatggatgaa agaatgcatg cttgtaatag catctgtctt gaaggacttc attgcaaaca
     4021 ttgaaggaag tttacttact tctgacttat atgagaattg acttagcatc ccagatgaaa
     4081 gaactctggc tg
//
