LOCUS       XM_039099376            1863 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120099005
            (LOC120099005), partial mRNA.
ACCESSION   XM_039099376
VERSION     XM_039099376.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-384               JACYVU010000329.1  108014-108397       c
            385-385             "N"                1-1
            386-1041            JACYVU010000329.1  107358-108013       c
            1042-1863           JACYVU010000329.1  89843-90664         c
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..>1863
                     /gene="LOC120099005"
                     /note="uncharacterized LOC120099005; The sequence of the
                     model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     inserted 1 base in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:120099005"
                     /db_xref="RGD:41089220"
     CDS             <1..>1863
                     /gene="LOC120099005"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     LOC120099005"
                     /protein_id="XP_038955304.1"
                     /db_xref="GeneID:120099005"
                     /db_xref="RGD:41089220"
                     /translation="GSNVDSSCVLRESRRRKTVWQAWQKKALLSAFSKNQYPSFWDRQ
                     ELARQMQLPASRIRVWFQNQRSRTGEVRHGPKRSSRGSIPLASQQLEEGFGSRSQGSS
                     MPSDSRRPRTRLTLQQRRILVQAFERXPLPGFATREQLGQRTGLNEDTIHIWFQNRRA
                     RQARAPDQDVPASQVQDVATGGLSGKDEAAPDNLLLMAAAGGVGMENSSSSDQPHFHE
                     ESQHPQVALPEGRGQSQTATQAYEPGTLELLLDELLEEDQVEGDRPFPVDLDGNPGGK
                     VHGVVQETILQLAATDCVSKESSSYSDPTNFSRESQLPQWAQPEGQGQEQALTQGCNR
                     GPLELFLDQLLMQGSNVDSSCVLRESRRRKTVWQAWQKKALLSAFSKNQYPSFWDRQE
                     LARQMQLPASRIRVWFQNQRSRTGEVRHGPKRSSRGSIPLASQQLEEGFGSRSQGSSM
                     PSDSRRPRTRLNLQQRRILVQAFERNPLPGFATREQLGQRTGLNEDTIHIWFQNRRAR
                     QASAPDQDVPASQVQDVATGGLSGKDEAARDNLLLMAAAGGVGMENSSSSDQPHFHEE
                     SQHPQVALPEGRGQSQTATQAYEPGTLELLLDELLEEDQVEGDRPFPVDLDGNPG"
ORIGIN      
        1 ggaagcaatg tggatagcag ctgtgtgctg cgggaatccc ggcgcaggaa gacggtttgg
       61 caggcctggc aaaagaaggc cctgctatca gctttcagca agaaccaata cccgagcttc
      121 tgggacaggc aggaactggc caggcaaatg cagctccctg cgtcccgcat ccgagtgtgg
      181 tttcagaacc aaagaagtcg cactggagag gtgaggcacg gcccaaagcg gtccagcaga
      241 ggctccattc cgctagcctc ccaacagctc gaggaagggt ttggctccag gtcacaaggt
      301 agcagcatgc cctcggacag cagaaggcct cgcactcgac tcaccttgca acagcgcagg
      361 atcctagtgc aagcctttga gaggnaaccg ttgccaggct ttgctaccag ggagcagctg
      421 ggccaaagga caggtttgaa tgaggacacg atccacatat ggtttcagaa cagaagagcg
      481 cggcaagccc gcgctccaga tcaagatgtg cctgcttcac aagtgcagga tgtggcaacc
      541 ggaggtctca gtggcaagga tgaggcagca ccggacaacc tgttattgat ggctgctgca
      601 ggaggtgtgg gcatggagaa ctcgagctcc agcgaccagc cccacttcca cgaagagtcc
      661 cagcatcccc aagtggcact gcccgaagga cgaggccaat cacagacagc cactcaagca
      721 tacgagccag gaactctgga actcctcctt gatgaactgc tggaagaaga ccaagtggag
      781 ggtgacaggc cattccctgt ggatctggat ggaaatcctg gtggcaaggt gcacggggtt
      841 gtccaggaaa ccatcttgca actggctgcc acggactgtg tttccaagga atcctcaagt
      901 tatagcgacc caaccaattt ctccagagag tctcagctac cacaatgggc acagcctgaa
      961 ggacaaggcc aagaacaggc tctcactcag ggatgcaaca ggggccctct ggaactcttc
     1021 ctggatcaac tgctgatgca aggaagcaat gtggatagca gctgtgtgct gcgggaatcc
     1081 cggcgcagga agacggtttg gcaggcctgg caaaagaagg ccctgctatc agctttcagc
     1141 aagaaccaat acccgagctt ctgggacagg caggaactgg ccaggcaaat gcagctccct
     1201 gcgtcccgca tccgagtgtg gtttcagaac caaagaagtc gcactggaga ggtgaggcac
     1261 ggcccaaagc ggtccagcag aggctccatt ccgctagcct cccaacagct cgaggaaggg
     1321 tttggctcca ggtcacaagg tagcagcatg ccctcggaca gcagaaggcc tcgcactcga
     1381 ctcaacttgc aacagcgcag gatcctagta caagcctttg agaggaaccc gttgccaggc
     1441 tttgctacca gggagcagct gggccagagg acaggtttga atgaggacac gatccacata
     1501 tggtttcaga acagaagagc gcggcaagcc agcgctccag atcaagatgt gcctgcttca
     1561 caagtgcagg atgtggcaac gggaggtctc agtggcaagg atgaggcagc acgggacaac
     1621 ctgttattga tggctgctgc aggaggtgtg ggcatggaga actcgagctc cagcgaccag
     1681 ccccacttcc acgaagaatc ccagcatccc caagtggcac tgcccgaagg acgaggccaa
     1741 tcacagacag ccactcaagc atacgagcca ggaactctgg aactcctcct tgatgaactg
     1801 ctggaagaag accaagtgga gggtgacagg ccattccctg tggatctgga tggaaatcct
     1861 ggt
//
