LOCUS       XM_039099250            1227 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus igE-binding protein-like
            (LOC120098907), partial mRNA.
ACCESSION   XM_039099250
VERSION     XM_039099250.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..1227
                     /gene="LOC120098907"
                     /note="igE-binding protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 2 Proteins, and 82% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120098907"
                     /db_xref="RGD:41102135"
     CDS             <1..1227
                     /gene="LOC120098907"
                     /codon_start=1
                     /product="igE-binding protein-like"
                     /protein_id="XP_038955178.1"
                     /db_xref="GeneID:120098907"
                     /db_xref="RGD:41102135"
                     /translation="DEEAARYEEEKYHPEEQKKGNKKLLPRQSPTAPPPYEARSCAFS
                     LVPDRVRRKLQLTFPVFETQEGERVHAPVEYNQIKELAESVRKYGVTANFTLTILERL
                     ALNYLTPADWQMITKATLGNMGQYMEWKVLWYEAAQTQARANATALTPEQREWTFELL
                     KRQGRFAADQANYHWGAYIQVSSSAIKAWKALTRKGGADNQLTRIIQGPQEPFSDFVA
                     RMTETAGRIFGDAEQAAPLIEQLVYEQATQECRAAIAPRKNKGLQDWLRVCRELGGPL
                     TNTGLAAAILQSRQRPLKGTDTRSCFRCGKMGHLKRDCRITKGDRRPATICARCGKGY
                     HRPDQCRSVRDIKGKLLPPLEAKPNEMSKNGSLGPRSQGPQRYGNRFQKAMTLTEETP
                     QEVTQNWTCVPPPTSF"
ORIGIN      
        1 gatgaggaag cagctagata tgaggaagag aaatatcacc ctgaggaaca aaagaaaggt
       61 aataaaaagc ttctgccgcg gcagtcgcca accgcacccc ctccgtatga ggcgcgctct
      121 tgcgcattct ctttagtccc cgatagggtg agaaggaagc tgcagttgac gttcccggtc
      181 tttgaaacgc aggagggtga gcgggttcat gccccagtcg aatataacca aataaaagag
      241 ctggcggagt ctgtcagaaa gtacggagtt acagccaatt tcaccctaac cattcttgaa
      301 aggctggccc taaattattt gacacccgcc gattggcaga tgattacaaa agcgaccctt
      361 gggaacatgg gccaatatat ggaatggaaa gtgctttggt atgaggcggc tcaaacacag
      421 gccagagcta atgccacggc gttaacgcct gagcagcgag aatggacgtt tgaactcttg
      481 aaaagacagg gtcgcttcgc agcagaccaa gctaattacc attggggtgc ttatattcaa
      541 gtctccagct cggccattaa ggcctggaag gcactcacta ggaaaggcgg ggccgataat
      601 caacttactc gtatcatcca gggacctcag gaaccgttct cagacttcgt agccagaatg
      661 acagaaactg ctggacgaat atttggtgat gcggagcaag cagcaccgct catagaacag
      721 ctcgtttacg agcaagccac ccaggaatgc cgggcggcta tagcacccag aaaaaacaaa
      781 ggattacagg actggctcag agtctgcaga gaactcggcg ggcctcttac taacacaggc
      841 ttggcggccg ccattctcca gtcccggcaa cgccccctta aagggacaga tacaagatca
      901 tgttttcgat gtggaaaaat gggccattta aaaagagact gtaggataac caagggagac
      961 aggaggcctg caactatctg tgcccgatgt ggcaagggct accataggcc tgatcagtgc
     1021 cgctcagtga gggatattaa gggaaaatta ctccctccct tggaagctaa gcctaatgag
     1081 atgtcaaaaa acggatcgtt gggcccccgg tcccagggcc ctcaaagata tgggaaccgc
     1141 tttcagaaag ccatgaccct gacagaggag actccccaag aggtgacaca aaattggacc
     1201 tgtgtgccgc ctccgacttc tttctaa
//
