LOCUS       XM_039098731            2669 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus developmental pluripotency-associated
            protein 5A-like (LOC120098792), mRNA.
ACCESSION   XM_039098731
VERSION     XM_039098731.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098731.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2669
                     /gene="LOC120098792"
                     /note="developmental pluripotency-associated protein
                     5A-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120098792"
                     /db_xref="RGD:41289337"
     CDS             1..351
                     /gene="LOC120098792"
                     /codon_start=1
                     /product="developmental pluripotency-associated protein
                     5A-like"
                     /protein_id="XP_038954659.1"
                     /db_xref="GeneID:120098792"
                     /db_xref="RGD:41289337"
                     /translation="MATLVTRKDIPPWVKVPEDLKDPEVFQVHTLVLKSLFGPQGSRM
                     PHIEQVSRAMFELKILESSGLTEVLIYGSCNHKLRAKWMLQTMAERYRLRQERGMLKL
                     EEAMKTLELGQCLE"
ORIGIN      
        1 atggcaaccc ttgtgacccg taaagatatc cccccgtggg tgaaagttcc tgaagacctg
       61 aaagatccag aagtattcca agtccacacg ctggtgctaa aatctctgtt tggcccacag
      121 ggatctcgaa tgcctcacat cgagcaggtg agccgggcca tgtttgaact gaagattctg
      181 gaatcttccg gacttacgga ggtcttaatt tatggctctt gcaaccacaa gcttcgggct
      241 aaatggatgc ttcagaccat ggctgagagg taccgcctgc gccaggaaag aggaatgctc
      301 aagctggagg aagccatgaa gaccctggaa ctgggccagt gtttggagtg aagccagttt
      361 ccagtcagta tgactcccac ctgcacacac acagattgag ccgtggctgg tgtttggttc
      421 tggcgtggtt tttaactacg ttatatcctt tatagtctaa cgagatattc ctggatcccc
      481 gctgtgactt ctgatgagaa tatctctttt tccaaggctg ttattttaac gaataaaatt
      541 taaatgatta aaaaaatata tttagcatgt gctctgtgtg tgtgtgtgtg tgtgtgtgtg
      601 tgtgtgtgta tgcatgatgg atcaaactca ggttggcaca cacttgtgcc aagaattggg
      661 cattgcctta tcatctcctt tatttttact agactattcc tgtggaccat cttcgctctg
      721 ctatgtttaa aagtaaaacg tattaaaatc cacataaaat taagctccct acccatttga
      781 agtatacgga tgagtatttt tatgatcccc gcattattgt acagacaggt ctccagaatg
      841 ctttcatgtt gcaaaatgga aacaccgtgc aggctgaaca acttcacaga cgtcaaacag
      901 cttcccagat cccccttcaa gtggccagat tttaaccttc ctttcttcct attggacata
      961 gatggtacaa tttgtgtggc ttatcccctg cttaggtaac ccgcaccaac atcatcctat
     1021 tctaagtgaa attctgtatt tctcatttta ttcatagata attatgctgc agagttgacc
     1081 tgtgattagc attctgacac aatcgtgttt gatttgacct gggaccagga ctacagaaaa
     1141 catagaaaga ctatagagaa gtcatccaca gtggttatcc tgccagggac agaaatagaa
     1201 acaaaccact tcatggttga aaagcaacaa aaactgctgt aacttatcac cttgaaatgg
     1261 gtctgaacgc tcacgttttg tttttacttt ttgttgcttg tgcaagtggg cgtgtagaga
     1321 gctttgcaga gttttaagtc agttctttct atcagacggg gtctggggaa tcaccaagca
     1381 aggcagcaag ttccatactc actgaatcat atcaagtgag tcctcacaca ttccttcaac
     1441 tgaccaccaa gttctgactg ggataggaaa cagaaggaac tgtgtctaga aattgtctta
     1501 agactgtgag acttgatgtg gaaacaagcc ctgttccaaa gtccttgcag atggctcccc
     1561 ttcatcaaat gacaagaaga cgatctctga gtcttcaatt cactccctga gtagtgtttt
     1621 gtgtctgttt tgtcagatac tactgacgtt ctgtgtttgc cgctgtcctc atccttactg
     1681 atctggtgac aatccattag tcatgacagt tgtatcccaa ctgatcagct atgacagctt
     1741 ctctgttgcc tcagaactga aagccaaacc ctgctttgct aagtgagaaa cacatttcca
     1801 actcgccagt cttatattat gactaaaagt gacttcagca taggacagca gttttcaact
     1861 tgttggtcat gacccctttg gggatcacgt atcaaatatt tacattataa ttcacaatga
     1921 taacgtaatt acagttgtga aatagcaatg ggatactttc atggtcggag gtcatcacaa
     1981 catgaagaac tgcattaaaa gatctcaaca ttaggaaggt tgagaaccac tgctctaggc
     2041 aaacacattt ttcttgctcc agtcttagaa atgagaatca aggccttaac atcctgctgt
     2101 ccctattcct ttaagggcaa ttagaaacaa aggaaggatg tgagtagaat tcggttttca
     2161 aatttgtgta agttggacag ggtcaccacc tctctgtgtg aagagctggt actcagatct
     2221 taatacccga aatacccgaa acacctgaac tcattccagg atcaagaagt gaatggggaa
     2281 tcaggagtga ctggtaaatg ggcagagttg agaaactgga tcgcatctgt ttaatgttat
     2341 tccccacatc tttaagctcc tagatctttg gttctatgag atggtttagt ctataaaaca
     2401 cttgttttgc cagcacgagg atctgacttt agatccagag cacccacatg gacaaaatga
     2461 ggtaccgcag taggcttctg tgatccaaac accaaatgaa tgggagaaag aaggagcatg
     2521 ggtggggttt gctggccagc tagtctggtt gaatgacagc tccggattcg tttagagaca
     2581 agcctcaaac aataaggtgg gtgggaggaa gacactcgat ttgacttttg gcctccacat
     2641 gcaaatggag gccacactta aacacacat
//
