LOCUS       XM_039098225             851 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus small nuclear ribonucleoprotein E-like
            (LOC120098617), mRNA.
ACCESSION   XM_039098225
VERSION     XM_039098225.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..851
                     /gene="LOC120098617"
                     /note="small nuclear ribonucleoprotein E-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 9 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120098617"
                     /db_xref="RGD:41281721"
     CDS             490..825
                     /gene="LOC120098617"
                     /codon_start=1
                     /product="small nuclear ribonucleoprotein E-like"
                     /protein_id="XP_038954153.1"
                     /db_xref="GeneID:120098617"
                     /db_xref="RGD:41281721"
                     /translation="MRHLNSGPLPIRVVFVTSTMAYCSQGQKVQKVMVQPSSLIIRYL
                     QNRSRIQVWLYEQVNMWIEGCIIGFDEYMNLVLDDTEEIHSKTKSGKQLGQIMLKGDN
                     IALLQSVSN"
ORIGIN      
        1 catcgcttga gtttcttgtc atcattctct atgtatacat atatctatat gttattagat
       61 agatagatag atagatagat agatagatag atagatagat gagaagatgg gtagatggat
      121 agacagacag acagacagac agatattcct gtgtgtgcag gagtgaatgt gcccatggag
      181 gctccaggtt gaactcctcc ttgaacactc tgcaccttat tcattgtggc agaggttctc
      241 aactgatcgg agagctcacc cacacactag ctgggctagc cagcttgcta tgcagatccc
      301 atgtctctgc cttccaggca ctaaaattac aggtgggctg tcattagaac agggcattgg
      361 ggttggggat ttagctcagt ggtagagcgc ttgcctagga agcgcaaggc cctgggttcg
      421 gtccccagct ccgaaaaaaa agaaccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaagaac
      481 agggcattaa tgaggcatct aaactctggt ccgcttccta ttcgtgtggt ctttgtgact
      541 tccaccatgg catactgcag ccagggccag aaggtgcaga aggtgatggt gcagcccagc
      601 agccttatca tcagatactt gcaaaataga tctcgaattc aggtgtggct gtatgaacaa
      661 gtgaatatgt ggatagaggg ttgtattatt ggctttgatg aatacatgaa ccttgtatta
      721 gatgatacag aagaaattca ttctaaaaca aagtcaggaa aacaactggg tcagatcatg
      781 ctaaaaggag ataatatcgc tctgctccaa agtgtttcca actagcagtg gtcaagcatg
      841 ggagaagtcg a
//
