LOCUS       XM_039098181            1278 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus disks large homolog 5-like
            (LOC120098582), transcript variant X1, mRNA.
ACCESSION   XM_039098181
VERSION     XM_039098181.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098181.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1278
                     /gene="LOC120098582"
                     /note="disks large homolog 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120098582"
                     /db_xref="RGD:41235451"
     CDS             69..686
                     /gene="LOC120098582"
                     /codon_start=1
                     /product="disks large homolog 5-like isoform X1"
                     /protein_id="XP_038954109.1"
                     /db_xref="GeneID:120098582"
                     /db_xref="RGD:41235451"
                     /translation="MFARLRRCFGRVDVDGEESRVKQRKPQSNDGHRMRSWGMWKACR
                     QTPSLESVLNKVQANKEEERLNRELELTTKEKNELTDRLLYVTGGSMNKSPYFRPNPF
                     YENLKIKENEVMSLLHNLHTNNIEHREKFQELKKETNFYRNLHSRLLMDQACMKKKLV
                     TLKQESKELQRYLFELNPNDEDGQEKTSNLQTQQNLVSETTGDME"
ORIGIN      
        1 caccagtgtt gtagtgacaa ccagttccct actttttctc ttagtgtcca aaggatatat
       61 ccacaggcat gtttgcccgt cttcgcaggt gctttgggag agttgatgtt gatggagaag
      121 agtctagagt gaagcaaagg aaacctcaaa gtaatgatgg acacaggatg aggtcatggg
      181 gaatgtggaa ggcctgcaga caaacgccat cccttgaatc tgtcctaaac aaggtgcagg
      241 ccaacaagga agaggagagg ctgaatagag agctcgaact aactaccaag gagaaaaatg
      301 agctgacaga tcgcctcctt tatgtgacag gtggatccat gaacaagagc ccctacttca
      361 ggccaaatcc attttatgaa aacttgaaga taaaggagaa cgaggtcatg tcattactgc
      421 acaacttaca cacaaacaac attgaacatc gtgagaaatt tcaggagctc aagaaggaga
      481 ctaacttcta tcgcaacctg cacagccggc tcctgatgga ccaggcatgt atgaagaaga
      541 agttggtcac actgaagcag gagagcaagg agttacagcg atatttgttt gagttgaacc
      601 cgaatgatga agacggacag gagaaaacca gcaacctcca gactcagcaa aatttggtct
      661 cagaaactac aggagacatg gaataggatg tatcccagga agacagcccc ctgaagaatg
      721 agtttcttcc tcacgagttc cctgctgatg aaaatcctca acagtcaaag actttttgtg
      781 ggtgaatatt cttcttctca gttaatttcc tcaatgttta gagaccctga atttatgtat
      841 ccgtatgccg gcctgtctga ttgaggtctt tctcctttct tataccgaca acaccatttg
      901 agagacaact gaggggactg ccttgacatc tcatgtccta gaggagaaac agcactacaa
      961 ctgtgtttct aaatggtcat taagaaaatg ctgttaagaa atagtttggg ttatgatttt
     1021 cattgaagtt tttttgttgt ttcatagtta tatattcttg ttactgtttt tcattttttc
     1081 aatcatttta attgttcatt ttatgcctgt tttttgttaa ttgtattcct tatgaataaa
     1141 aattgatttg taactcttga ctcttaagac cattttcatt attcaagtgt cctttcccct
     1201 cctgtagact tagaactgac agctagatat ggatctttgc atggtccagg gagcatgggt
     1261 aaatagtgaa ttcaaagc
//
