LOCUS       XM_039098141            5468 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120098541
            (LOC120098541), transcript variant X1, mRNA.
ACCESSION   XM_039098141
VERSION     XM_039098141.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098141.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5468
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5468
                     /gene="LOC120098541"
                     /note="uncharacterized LOC120098541; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 3 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120098541"
                     /db_xref="RGD:40998408"
     CDS             65..733
                     /gene="LOC120098541"
                     /codon_start=1
                     /product="uncharacterized protein LOC120098541"
                     /protein_id="XP_038954069.1"
                     /db_xref="GeneID:120098541"
                     /db_xref="RGD:40998408"
                     /translation="MPIHCRHFCPFRNSCSSFCDMFLCRDIRAGYPLTQSQEKQVLCF
                     LTSAAKSILCLLLCLHGLEVGILMTSRSRHSLCEDCVGRCRGGETLDHGGGQEQRHPQ
                     NYPFYQSFEERGPQPPNWTSEPRKFQDTAEWALAISAKKKRQEIFHLSIFLVYLLSAS
                     RRLTRVGFCLCEPGMSRVKEDHRSHIVPTKPHLADSQATAACSFLGNICRGWAVRMVV
                     DRLF"
ORIGIN      
        1 ctgccttcca gctcactgat ttctttctgt cccctctgtt ctgctgttga gttcagcgat
       61 tagaatgcct attcactgcc gtcatttttg cccattcagg aattcctgct caagtttttg
      121 tgacatgttt ctttgccgag acatccgggc aggatatcct ttgacacagt cccaggaaaa
      181 gcaggttctc tgctttctga cgtcagctgc caagagtatt ctgtgtctcc tgctctgcct
      241 ccatggacta gaggttggga ttctcatgac atccagatcc cgccactccc tctgtgaaga
      301 ttgtgtgggg cggtgtagag gaggagagac ccttgaccac gggggtggtc aagaacagag
      361 acatccccag aactaccctt tctatcagtc attcgaggag cggggtcccc agcccccaaa
      421 ctggacctca gaacccagaa agttccagga cactgccgag tgggcccttg ctatctctgc
      481 caagaagaaa agacaagaga ttttccatct ttccatcttc ctcgtttatc tgctttcggc
      541 atcccggaga ctgacgagag taggcttctg cctctgtgaa ccaggcatgt cccgggttaa
      601 ggaggaccac agaagccaca ttgttcccac aaaaccccat ctggcagact cccaggccac
      661 tgctgcctgc agtttcttgg gaaacatttg tagaggctgg gctgtgagga tggttgtaga
      721 caggctcttc taagaagaaa ctatgacttt tggaggatgt tttaaacatg gagctcgtcc
      781 tcactgctct tcatccccca gaacctacag ctatgcagag ccagcttgtg aatattcagg
      841 accctgtaga cattcttctg catcgttccc cactcctcat tttgtgctga gtcttaagtg
      901 aaatggatct tttaaaaatt tggagaaaga aatctgtctt ttgttccccc cacaccctag
      961 gggctcctca gaagaggtgg ggccctgccc tgtttgaggg gcatgtctca gaaccaatca
     1021 ctgcctggca cagctccctg gacactgggc ttgggctcca tgccatacga ccagatggct
     1081 gtgattgctg gcaacctgag accctgcagg agagtcgtgt atgggtgttt acagcgtcct
     1141 gggcccaccg agagcatcaa aatggcaggc tgagtggtgg ccagtcagag cacattcctg
     1201 aaaaagaaga aatgcctgcc ctggcagaga agggggagcc cccagcccag gtccagatcc
     1261 caacatccag caccaggcac gaggtcacat gtagggaaag caatctagca atttaagggt
     1321 gccacccatc tgtgtctcca tcatggcctc tgctttgggg gaacaggctc tcaaggattt
     1381 agacctctct gagctgatct gcaagagaac cctgcatttc ctcatcgctt catttggggc
     1441 acagatttga acactcaggg tttagtacga acacacaaac tactttgttc actctgatga
     1501 aataatttaa aaagaagaag agtaagattt aagccctctc gaccacttct ggtcaacccc
     1561 tccgccccca atcagctcac gtccagtgtg tgtggctgag cacatgggaa gggttctgtc
     1621 cattctctaa aatgatctat ggctctgcag gctcaaggga cacccgcccc ccctcctcct
     1681 ctgatgcttc atcatctttc cagttattct gaagaccact gaaggcaagg ctctggtggc
     1741 ctttctctcc caagatgccg gccacattgt gggtgcttgt cacatgcatc acacagtcag
     1801 tgtggaaatg atgcttcctc aaggctctca taaacatgcc agagacagtc cgcagagaag
     1861 actgagcctg acaacctgac ctattcctct gctgcttaga gctcctagag gctgtcatcc
     1921 ccacgcctca gacctcgtac gcagctcttt acgttccacg gcttgcactc ctcccttttc
     1981 tttttccctt tttatttaat gagcacctac tatattccat gctccatcca tgggccaaca
     2041 gcgtgacgat cgctaaaatg tgcaagttct atctcgcatg ggtagcctgt tagtggaatg
     2101 agctagagac aaagagcaag ggaccagatg cgtgtattct atgttagggg gaggtaaggg
     2161 ccttgattat caatgggaga caaggtgagg ggagagatca tggcaacatc tggtcagaga
     2221 cttgaatgaa atttagggta ggcaaaagtt gggcccagtt ctttctccca gccccctgcg
     2281 ctcagaaata agactcagac ccaaaataca tttacaaata cctcagccat acagctagtt
     2341 tctacactga ctagatcata actaaaataa cctagttatt ttagccaata taccgtcaca
     2401 tggctgggtt acctgtgctc aagtaccatg tgtctatctc ctcatacctt cctggagaat
     2461 ctcccatttt attctatccc agaattcttt ctccttttgg atgtcccatc ttccatttcc
     2521 tgcctaagcc atagacctta ggcctcttaa ttaacagaca ctgcatccat acagtacaca
     2581 agatattctg tctacaagga cagactgtgt ggccacccag aagaatatcc tatggggatg
     2641 ctacagcagg tgcaaaggcc ctgagtggga aaaggtagcc tttctgccgc aacaaaccaa
     2701 ggtggctgat tctcatggca cccgtaatga gggagaacta ggcgcagtgt gttaaggaca
     2761 ataccagcct ttcagtcctg gtggggaagg tgactggcgg actaagctga tctgccccag
     2821 gaagcagaga gcagagtgga gcgcacactc aaatctttat tttttttttt ttgaaagtga
     2881 gaccttcctg ttttatgttt taaaatgtag catggtttcc caacaagttg gaaggtattt
     2941 ttaaagctct ttttacaatt ctgctttggg cgcacaaaag tcaacgacag atcaaaccca
     3001 gctgcaaaca aagtcaggga gctttggaat cagttttcct tgcggtccct gatgacccag
     3061 atcttgactg atgggttcca cttccagcca cagccagata gccctttgca gccccaaagt
     3121 gaagtctagt gggatctgag aagcccttgg atctggggtc ctcgaaaggt agggcagata
     3181 cctgcctcct agagggcccc gagcctgtct ggtcagaact gaggttgttg gtgtggaaat
     3241 agcatctgtt ccacactttc aggcctcaga cacgtggtcc cacctagacc ctgccccaag
     3301 ccagttctct gctttgcctg ccctacctta ggccagtgga agcaggctgc catcctgcct
     3361 gtggctagga gaatggtcaa ccttgtgttc cagctttctt agggacactg atgctgaatg
     3421 ggacctcgac gatcccttgt ctcccatgga agccccactt gctctggcag acctcggaag
     3481 gcaggctgga gttgctcttc tctgtctctt agcagctttg ttaggaatga ttttcacatt
     3541 gacgcactca gccccccccc ccacctctac tcaagccctc taccgagagc ccccatttgt
     3601 actaatggaa gtcctgtggc ctagacaggg ctccctgctg gaaagaggcc tcaggctgcc
     3661 cacctgcaaa catgaccttt tcctgtgtaa gagacaagat ttcaaaatca atcaggcctg
     3721 catatctgac catgccagag aagaggctac atgtcctatg acagagggct caataaaagt
     3781 cctaggggcg agcctaccca ggaggccagt cttgccccat gcactgctcc cttgcttctt
     3841 caaagacata catccactgt gaagattgca acagttcccc aaagggcaac tttctttctg
     3901 gaaccctacc tgcccttcag attcccctct gtgtgacaga tccagtggtc ttctgaccct
     3961 ggggctccaa gttgacactg ggtggccaca atcttggcac acagatacat ctgccccacc
     4021 atcattccgg aagaatcctt tcctgccctc tacctcactt taaatcattc ttcctcgcaa
     4081 ctcacatgca ttcttaaagc cttgcctgcc atgtgctgtt caagtcactc tgcatacaga
     4141 cttcgttttc ctttgggcct ctgtggcatc tatggcttag gcaacactta ctgtcactaa
     4201 ggctctggta cagctagaac tgtctctgtt ttgccaagtg tccttagaac tgagaaggaa
     4261 tcaagtcctt gacagtgtag actggcttag cccgcactgt caggccatgc ggttctgccg
     4321 atgatcagtt ctagagaatc tcctgtgtca tacaaggtcc cctggtcacc aagaaggatc
     4381 agaatgaaca cagactatcc agagtggtgc ctgaaccctg acatgctcat catgtagatg
     4441 gtaaaagtgc catatgtccc ctcttctgcc aacccatctt cactaatgac gtctgtggct
     4501 tttctcctgc ctgctacacg agaactcaga cgagtggtca gagactcatc ccaacgatgt
     4561 tcttgaaggt gggaaaggca ggagggacct ggttaggaag taggcccctg gcttcacata
     4621 cttgagtctg tatctgccct ctcctcttcc tgtgttccat ctgctctgtt tcctgtccat
     4681 gcacacaggg ccagataacc acggacagaa ccctctagga tccagagctg aaataaacct
     4741 ctcctccctt aagttgattt tgtagtgatg cggaaagtaa ctaaacagac cccactgggg
     4801 ctacatctcc tattgctgct tcctaccccc atggactgcc aacacccctc agccttgctc
     4861 tgttccgtcg cagggcaggt ccttttgggg atttgctgtc ctctgtgaac tggtgttgta
     4921 tgtccatctg aaccacccgc cgaggctggg tgggtgacca gtgagggttc ctgcagcaac
     4981 tccttgtaca atgaactagg gatggagtgg gttcctgaag aaaggattcc aagcagagcc
     5041 tttatgggcc gtcaacacac agtgggcctc ttgtcctagg ttagagtttc cttcatcagt
     5101 ggtcccagct attcccacct cacaccacat tctctgtcgt tccttgaggt ctagagggac
     5161 tttcatatcc tgaatccttc tgacaaggat cagggtggag gtgctcagta aacgtccacc
     5221 gtcatcaagt gaccaatcac tgctccccgt tcagctccag ctctctagaa gctagggtct
     5281 ttggggtcca ctgaaaaacc aggacagcag gggaaggcca gaacaggatc ccacaaagcc
     5341 agtcactctg tgtgtctagg aagcctcctc ctagcttctt tagactttgt tgtcggcttg
     5401 gggatttagc tcagtggtag agggttcggt ccccactccg aaaaaaaaaa aaaagaataa
     5461 aaaaaaaa
//
