LOCUS       XM_039097996             813 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus scavenger receptor cysteine-rich
            domain-containing protein SCART1-like (LOC120098479), mRNA.
ACCESSION   XM_039097996
VERSION     XM_039097996.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..813
                     /gene="LOC120098479"
                     /note="scavenger receptor cysteine-rich domain-containing
                     protein SCART1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 93% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120098479"
                     /db_xref="RGD:41257465"
     CDS             73..813
                     /gene="LOC120098479"
                     /codon_start=1
                     /product="scavenger receptor cysteine-rich
                     domain-containing protein SCART1-like"
                     /protein_id="XP_038953924.1"
                     /db_xref="GeneID:120098479"
                     /db_xref="RGD:41257465"
                     /translation="MALSSLKLWHLLLLACCTLLPDMALGNFVNFLGGDNKCEGQVHL
                     QYHGQWSLMCGDGLGELEASVICRELGCGSVKTMLRYILTPEEMKQPWLYDAQCRGEE
                     ATFSECLLGSWGPVSGCQCQCVAAIICTGGTTRQMGLVDGSSPCAGIAQATGISNFSL
                     RCDLHEKEAGVVCRQLECGTALQWSRAHHGTNGYHERKYLTCQGTESDILHCLIDVNF
                     LEQCDLLTYTQIVCTDLDIDVAMTRMLH"
ORIGIN      
        1 tcctgaaggc agagacaggt acctgttctg aggccatcag ccttgggaac tgtacttaca
       61 aggagacctg tgatggcact gtcttctctc aagctgtggc atctactgtt gctggcctgc
      121 tgtactctcc ttcctgatat ggctcttggg aacttcgtga atttcctggg tggtgataat
      181 aaatgtgaag gccaagtaca cttgcaatat catgggcagt ggagccttat gtgtggggat
      241 ggcctgggcg agctggaggc ttcagtgatc tgcagagagc tcggctgcgg ctctgtgaag
      301 actatgctcc ggtacatttt gacacctgaa gaaatgaagc aaccttggct atatgatgcc
      361 cagtgccgtg gtgaggaagc caccttctcg gagtgcctcc tggggtcctg gggtcctgtc
      421 agtggctgcc aatgccagtg tgtggctgcg attatctgca ctggtggtac cacacgacaa
      481 atggggctgg ttgatggcag cagtccttgt gctgggattg cacaggccac tgggatttcc
      541 aatttctccc tgagatgtga cttgcatgag aaggaggctg gcgttgtgtg cagacagctg
      601 gaatgtggca ctgctctgca atggtccaga gcccaccatg gaaccaatgg gtatcatgaa
      661 cggaagtacc ttacgtgcca gggaacagag tctgacattt tacattgcct gattgatgtg
      721 aacttcctag agcaatgtga ccttctgacc tacacccaga ttgtatgcac agatctggac
      781 attgatgtgg ccatgaccag aatgcttcac taa
//
