LOCUS       XM_039097408            4511 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120098328
            (LOC120098328), transcript variant X2, mRNA.
ACCESSION   XM_039097408
VERSION     XM_039097408.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097408.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4511
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4511
                     /gene="LOC120098328"
                     /note="uncharacterized LOC120098328; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 9 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120098328"
                     /db_xref="RGD:41334317"
     CDS             115..1113
                     /gene="LOC120098328"
                     /codon_start=1
                     /product="uncharacterized protein LOC120098328"
                     /protein_id="XP_038953336.1"
                     /db_xref="GeneID:120098328"
                     /db_xref="RGD:41334317"
                     /translation="MSMSERQEKNHQLGRLFRTIVCPSLTPPTPARLDLILTYECETT
                     AKGCSQGALLGIQGTNTRQRTHPSPPHWQRKGDTGSRGYITPPQAVKAPLGSAQTRPT
                     ILGSTHIPGSHLAVPPFLALCEGGTPAPIHQSFQGRAEQAHKPTHLGWVLKTQAGALH
                     PSSSASFSTDVFGLLSFPPDNLIGEARPRAVPQGLPKSPLRPAPGPAAAPAFPAAVEV
                     EQRLSRWPSSPLLDHRGRRCPSPWPLGSASDPPSRAHPPAESQPVELSRRAGGLCGLQ
                     PTAGGSLPCGHSPSSSSLVCRLREAQVGTAAAESLPTASKPLRFSKERSKGSWLIA"
ORIGIN      
        1 gttcgaaaat gaaagccccc gctatacaca agacttctct ctcctcaatc cgcccatgta
       61 cttccgctgg ctctaggaat ttcagcaatc tctgaaactg ccctggttaa gttcatgtca
      121 atgtcagaga gacaggaaaa aaatcaccaa cttggaaggt tatttaggac aattgtctgt
      181 cccagcctta ctcctcccac tccagccagg cttgacctaa tactaacata tgaatgtgag
      241 acaacagcca agggctgttc ccagggggct cttctaggaa tccaagggac aaacaccagg
      301 cagagaaccc accccagccc tccccactgg cagaggaaag gggacactgg gtctcgtggc
      361 tacatcaccc cgccccaggc agtaaaggct ccattggggt ccgcacaaac ccgtccaact
      421 attcttggat caactcacat ccctggatca catctggctg ttcccccctt tcttgccttg
      481 tgcgagggcg gcaccccagc ccccatccac cagagcttcc agggaagggc tgaacaagca
      541 cacaaaccca cccacctggg ctgggtcttg aagacccagg ctggtgcgct gcaccccagc
      601 tcctccgcaa gcttcagcac agatgttttc ggcctgctct ccttccctcc agacaatctg
      661 atcggtgagg cacgacccag ggcagtaccg caaggtctcc ctaagtcacc tctgcggccc
      721 gcccctggtc cggcagctgc gcccgccttc ccagcagcgg ttgaggtcga acagaggctc
      781 agccggtggc ccagttctcc gctgcttgac cacagaggtc ggcgctgccc ctcgccctgg
      841 ccgctgggct cggcctcaga cccgccctcc agggctcacc cgcccgcaga gtcccagccg
      901 gtagagctga gccggcgagc cggcgggctg tgtggcctgc agcctacagc aggcggttcc
      961 cttccttgtg gtcacagtcc ctcctcctct tccctggtgt gtcgactccg ggaagctcag
     1021 gtagggaccg ctgccgcgga gagcctgccc acagcctcta agccgctgag attctccaag
     1081 gagagaagta agggatcctg gctcatagcg tgagcggcgc acacaggctc ctgcaaggtc
     1141 ctagagtggc cttgtgctca agccctctcc ttgacaactt ttaaacggcc agcactctgc
     1201 tgctgaggaa actcactaag gcgaaaggca tgctctttgc agtcttggct gctgcagaag
     1261 ggctcactat ccctaaagca gagcgagtct acattactta cttacacccc agtgggtatg
     1321 agctgaagct gagcagagtc aaacattctg ctctgctaac cacttaagag agatggcttc
     1381 tcattctgag cagccttgaa ggatagacaa ggactgcagg ggccgacttt cccccacaca
     1441 aatacacact tcggccatgc taatgagact tctgggtaac tgaggctctg gtggagaaac
     1501 aaaaggaaac taacttgtaa aatgtacaca cctgttctct acccagacga gcagtttacc
     1561 cagcagggct gcgatccaca aaactggtgt ttatttaaca agtcccagag aacctcgtgt
     1621 tcctttagat cggtggccag ctatttgtag gcgcacacag ctcagtcaga aaacttggaa
     1681 tccatgtctg gaaagtttca cagtgtcttt gaaaattata gattaataac tgagaacact
     1741 tggccatgaa gaggaggccc tggctacaaa atttcccctt caagcccaga gatctagaaa
     1801 aagaattcag cttacagaag gtcctcacag cagggataaa caacaaagga actttgtttt
     1861 agaaggcagt ttacaaggac actagaatgg gggaggggca ctgcactgat ctcttcacgt
     1921 gaccctgctc atttgtatct cggattccag agttggaagt ggaactccta aacagtcatt
     1981 gttcatccat tcagacctct attaaccatc tacaacatgc caagccttat gctacagaca
     2041 cactgaagag cctcgccttt aaagagctct ggcgtgctgt aagcaatgat acaatgtggt
     2101 aaccaggagg ggaggagcac ctaacctagt tttgaagggt ggaacctggg attaggacac
     2161 tgcactcgtc cttagggcta tcctgggaac attaccagag cagccaggga gaatgtgttg
     2221 gtatggagaa ggggactgga aggaaatgat gtcagactga gagaatttag tcaaaagggg
     2281 tgaggagaag ggtcaaccag aaataattgc catggtctca actacagtga taactctatg
     2341 aattggagaa ttcaatttta gacaaaattg tttttgaatt acctcttaca gaaatataca
     2401 aagtattaca aaaaaaaaag cagctggcat atggactcag agctcaggaa atgactaagg
     2461 tcaatatata aataattgtg tatttctaaa gaaaggagtg ggtactacca gtccaggaag
     2521 aatgctacag gaagaccacc cacataacta ctaatatata aggcacggac agtaggagaa
     2581 gcaacacttc tgaaggtgaa taagcaggga cagagcagcc acagaggaca gacgagaagc
     2641 accatgagcg gcccagcaca cacacacaca cacacacaca cagaggtgag ggcccaggac
     2701 agactgagaa tgtgcagcta gaatgggtgt gtgaaggagc tacattcgcc attagcgaac
     2761 tcgagccgag ggacacaaaa tgactgaagc actactggaa agcacaggaa gttaaatgga
     2821 caccagaggt tattccttgg aagagtggcg agcccacaca atcacaattt ctcttcgaca
     2881 gtatcagtgt tctatgcaga gaagcagcac acattgtaac cttccagatg gtccagcgta
     2941 tctgcatctt tccattacac caccatcacc tagccacaca tctgggtcac ctctcctcag
     3001 ctgcaggagg cttaacacca agtgtgatgt ttataagtga gcgtctagca acttcaaaca
     3061 ggcaggttcc caacttcaaa agactggttt gactaagcac tcagggagcc aaggacaatg
     3121 ccaatggtgg ctccgcgtat cgatgtgatg cttccagaac atactctgtg agaaaaacag
     3181 aagtatataa tctatgaaac aaatgtctag ctttttgagg gtctcagact aggttaagga
     3241 aaaacaaaac aaagcaaacg gcattactat ctccatgtgt tcctggagct ttctttccct
     3301 tctaaagata aacaaaagta ttcaggcaat acctcagtcc gttaagggct tgccttacat
     3361 gcaagagaac ctgactttga cccccagaac ccaaacaaaa aaagctgggc aacactgctc
     3421 acacttgtaa tggcacttga ggtgaatcgc tggggcttgc cagccagcct agactacttg
     3481 gtgaattcca ggccagtgac agccctgttc aaaaaacaaa gtgggtgatg tcagaggaac
     3541 aatagcctaa gttctcaggc ctccacatgc ccctccacca ccaccaccac cacacgcaca
     3601 cacgcacaca cgcacacaca tggaaatttc cagcttagtt tgggacacta cagttttctc
     3661 aatgagttag ttgctctttc ttttaagaat ttaaaatctt ctcacaatct acttcattta
     3721 tgcacagttt ataatgaaag ctccagctat ttaggccata ggagagcatg tccccaaaag
     3781 taaaaacacc cacaaatcac agagccggaa ggcacgaggc tcactcacaa aagcccagga
     3841 gcactgaaac tgtcttagct tccatttcga gccagcatac tctatcacgg atgtgactgg
     3901 accgagtgtg atactctagt ttccttgtaa ataaaccata atcagaccac ataaatcaga
     3961 agaagtactc cactgctaca cgcaagcaca tagctgttat aaaagccaag gatcaaataa
     4021 gactttaagg gtgttattag gtctgatctc tttagcacaa tcctgtgagt attttcttaa
     4081 aagtatctct gtatgaggca gaaactgatg actaatgcaa agagacgacc ccacgacacc
     4141 ggagaatata aagtaagttt aaaatcttta cattctaaga tccatgtgtg gggcttagag
     4201 tgggcagagc agcagagccc tcacctggcg tgcacaaggc ccttgattac atcctagggc
     4261 ctcaaaaaca acccagtagc caagcatctt taaaactaac tgccaaggaa gaagagtaga
     4321 agaagagcag gtttgctgct atggggctta gccgctcaca gccatccctg tgtgttctga
     4381 agcaggtgca aaaccggtgt gtggccacaa ggctctccaa tcttcagaac tactgagtgt
     4441 gtttttaact ggccacagca tttacaaaca ggactccatt aaaaaaaaaa tcaaaaaaca
     4501 acaacaaaaa a
//
