LOCUS       XM_039097383            7600 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mucin-6-like (LOC120098310), mRNA.
ACCESSION   XM_039097383
VERSION     XM_039097383.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..7600
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7600
                     /gene="LOC120098310"
                     /note="mucin-6-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 98% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120098310"
                     /db_xref="RGD:41150603"
     CDS             6377..7600
                     /gene="LOC120098310"
                     /codon_start=1
                     /product="mucin-6-like"
                     /protein_id="XP_038953311.1"
                     /db_xref="GeneID:120098310"
                     /db_xref="RGD:41150603"
                     /translation="MDTTRHTPLLFLSPTWTLPITHPCSSCHPHGHYPSHTPALLVTH
                     MDTTRHTPLLFLSPTWTLPITHPCSSCHPHGHYPSHTPALLVTHMDTTRHTPLLFLSP
                     TWTLPVTHPCSSCHPQGRYPSHTPALLVTHRAATRHTPLLFLSPTGPLPVTHPCSSCH
                     PQGRYPSHTPALLVTHMDTTRHTPLLFLSPTGPLPVTHPCSSCHPHGRYPSHTPALLV
                     THMDTTRHTPLLFLSPTWTLPVTHPCSSCHPQGCYPSHTPALLVTHMDTTRHTPLLFL
                     SPTWTLPVTHPCSSCHPHGHYPSHTPALLVTHMDTTRHTPLLFLSPTGPLPVTHPCSS
                     CHPHGRYPSHTPALLVTHMDTTRHTPLLFLSPTGPLPGHYPSHTPALLVIFLLWILVS
                     LSLTLEYFTPPILGQ"
ORIGIN      
        1 gctatcctgg agctcaatct gtagaacagg ctggccttga actcagagat tgaatgcctt
       61 tgtctcccaa ctgctgggat taaagggtgc accaccactg cccagaaggg attgggttct
      121 tatcatagac tacatggtta tatgagacaa aacaaagaac aataaacaaa aacagtagct
      181 cacaattgag ggatcccttt gtaccagacc tgggacaaag tgttttggat ggtttaactc
      241 cctggtgtaa tggtcaaacc ctactgaagt aagcgtcata tttcccctgt tgtgtacatg
      301 actgaactga aagtacacca gggttaggca gctatgagtt ggtagaatta tgattcgatt
      361 gcagcagatt cttcagagtc agagcctgta agcagcctct atactgttgc tgagttagtg
      421 ctgtgggtga cgttactgct ctaaggaggg acgaaggatg tgcaggcaat gtgctcaaca
      481 tgtgcagtcc agatgcatct tgcaggaagg aaggcaaaca gacctgattc cagaaccctc
      541 cagctgtttt gtgagtgctc ttttagggtg tggcagtaaa aagactccaa tttccatttt
      601 aagttgacaa acatagccct ccttgacata ttctagtaaa gaagctattt ttttttcata
      661 gttttaacct ggaatttccc aaacttatct gaacaggaaa tcatgtctct ttttttttgt
      721 gacacatcta ctaatgctta atgaacctta ggactgtagg gaatcccagc cagtccctga
      781 agtagtggca gcaccgtagc tggcagtgag cattctgtaa agcacagagg tctgtgacca
      841 ggcagctcag atgacaacca cagagtccta gttaaccaag gttaggccgc agctgatgtt
      901 tctaggctgc aggaagaagc catccaacag aattgggtgg tttgtttctc tcctgcgttt
      961 cccccatcac tgctcttgtc tagacccttt acacatcaaa tctgagctgt caaaacagtc
     1021 tcccgactaa ttccctgcct gctggttttc cctagtccat cctccgcacc tggtcagatc
     1081 tgtcttcttg aagtgctgct ttaagtgtgc tgctgtgctg gcccagatgt attagttcag
     1141 catttgagtc tgtcctggtt agccctggcc taccttcctc tctactgtag cctacactgt
     1201 agatgaagcg agtcatatca gattcctctg ttcatgctgc ttcctccagt caatttgaaa
     1261 agctccccac tgcttctcct gctgcttctg tcagattccc atgttctcat tctgtttctt
     1321 ctccactcaa cagcagttac tttgtgccta tatgccaagc actgtgctag gttatgacca
     1381 gcccttgcct cacagagcta atccaaacaa ataataggag gtaattgctt ggttttgttc
     1441 ttatttattt gtttattcat gtatttgttt tactttttgt tttatcaaga cagggtttct
     1501 ctgtgtaacc ctggctatcc tggaattcac tctgtagacc aggctggcac aaactcacag
     1561 gtgagcactt aaaggtgtgc gtcaccactg cctggctttt ttctttttta aagatttatt
     1621 tattatactt ttttgtgtag gaatgcttca cctgcatgca tgtgtttgca tcacaggtgt
     1681 gcatggtgcc tacagaggtc agaactggga atcataaccc ctgaaactag agtaccaggt
     1741 ggttttgagc ccctaagtgg gtactaggaa ttgaactgtg tcctctgcaa gagcaacagg
     1801 tattcttaac caccaaatca tctcttcagc cctgctttgt ttgaaacagg atctagtgta
     1861 gcacagactc acttcaaaat acctaagtgt agcttaggat gacattgaat tcaggatgac
     1921 actgtgcatg aaatgatctt tcaaccttta ccaactgagt gctgggctca cagacaggta
     1981 gcaccgtgcc tggttagtta cccatttcac agaagggctg cctattcttt ctcggggtcc
     2041 atagactgct tggaagaaag attttgcatt ttttttttcg gagctgggga ctgaacccag
     2101 ggccttgtgc ttgctaggca agcgctctac cactgagcta aatcctcaac cccggaagaa
     2161 agattttgaa gcctacaaga taaatgctat tgtcacttga aaggcagata gtacgaactg
     2221 gctaagggtg ggctaggtac atgggtttta cctgtaggct aaacttagga tatgctgtta
     2281 gatacacgca cacacacaca catgcacaca cgcacacaca cacacacgca cacacacaca
     2341 cacacatgca cacacgcaca cacacacaca cgcacacaca cgaacacaca cacacacgca
     2401 cacacacgaa cacacacacg cacacacacg aacacacaca tgcacacaca catgcacaca
     2461 cacgaacaca cacgcgcaca cacgcatgca cacacgcctt caaggaaagt ctcttactgc
     2521 cctgttggcc tggagaagac aggtaagagg acatatcagg acagtggtgc cttgggggag
     2581 gagagataac gcctggcctt tccctgcatt ctcttgttca gggactgcct ccctcctccc
     2641 taactcccag gcttttctaa gaaacacagt caggcagttg gttgccaggg caaccccaga
     2701 aggcagtctc agtccaaaaa cagatgctga agccccctac ctggagcctc agtgctttgc
     2761 tctgatagac agcaggtagg tggccagtca ctggaaagca acggagcagg gccaagatgt
     2821 tcgggtgggg ttgtgtggag gatgtggtag ataacctttg taagcactca gcagtgtccg
     2881 gatagaagag ccgacccaca gaacagtcca aggcatttta atgcacagaa atacttaaca
     2941 tgagcagcat atctttgttt ttctgagaca caaactaatt tatttcaggc ctcaggctta
     3001 gtagcatgca agtgacaacc tgcaggtctg aagcatgtgt gtggatccgc agtgctaatg
     3061 agattgtaga catggtggac ttctcttgca gcttttctgc tgtgttgaga ttgtcagcca
     3121 gtaactctcc tccagtgagc tgggcctgtg atctgggcgg tgggcactaa ttagaggaga
     3181 aggcagaaag ctcgagctcc ttgaagagaa gctcggagct gctgaaatgg aggggtgctt
     3241 acctggttca ccacttcttt cttcctctgt tctgtctgct cgaattgccc actgttctcc
     3301 ccacagcaag ggaagctgtc cgtgtgtagt cagaacgctg gcttccagtt tttcttcaat
     3361 ggcttgggca atttaagtgc cctgagccta ttttttttct atcatgaaat ggaatgagta
     3421 ccatctgccc caactaatca cagggttact gtcgaatgcc atgtaaggtt atttgtttta
     3481 agttttctgc tgggctggag aggtggctca gtggttaaga gctccgactg ctcttccaga
     3541 ggtcctgagt tcaattccta gcaaccacat ggtggttcac aaccatctgt aatgagatct
     3601 ggtaccttct tctggtgtgt ctgaagacag ctacagtgta ctcatatata ataaataaat
     3661 aaatctttaa gttttctgct atttgatact ggatgtccag cgggcctcac tccccacaca
     3721 gccaaagatg accttgaagt tctggtcctc ctgctcccac ctctcaatgc tgagcgtatg
     3781 ggctatgcca agttttaatg tggtatcgag gatagagccc aggctccgtg catgctaaac
     3841 aagaactcta ccaagtaagc tatatccctg gccccgtttt gggatggtgt cacaccacac
     3901 gtcaaagccg agtttcaact cacagcagtc tttctacctc agcctctcaa ctcccgcaga
     3961 ccattggtgt aacgccatgc ctatataggg taatttataa aagagtgctt tatacaatgt
     4021 gagtagcaaa aaggcaggag aagaggagga agaagaagcc actgtcacca tgcagtcagc
     4081 aactgcgtgc ttgtgttcca gccaccatct tctttattcc tgggatctcg cgtttatgaa
     4141 gatgctggtc cacagaagca gtgcactgtg cgtcttccgt tgagatcttt ggcagctgtc
     4201 aggtggatca gtggtcaccg ttgtctcaca agttcctaaa cacactgtaa gccccaggag
     4261 agggatgagt tttagttgtc gcctccaaga tactgaacac aggggctgga gagatggctc
     4321 agtggtgaac agcactggct gctcgtccag aagacctagg tttgattctc agattcccag
     4381 taccttcctg gtcactgaca aacagctata attccagttc cagagcattt gatgccctct
     4441 tctggtaaag gtgcctgcat tgtgccatga gcacacacgg caatgatttt aaaaaatagt
     4501 ttttaaagga aacctaaggc tagaaatatc tagcccctca ttattgctca agtttgatgt
     4561 gtcctctgct tttcttcgct tgttttggtt gacccactgt ctcacatagc tcaggctgga
     4621 ctcaaactaa ctaggagcca aggatgacct tgacctaata aataaattat aaattatttt
     4681 gtatgtatgt gtaagagaaa gcacggtgca aaagtcagag aataaattgg agggttcaaa
     4741 ctcaatcatc aggctgcagg gaaagtgctc tcaccatttt ggctctagcc attttgctag
     4801 cccaagtttc aacttctaat tcccctgcct cctgcctcct ggctcccaag tggtaagcgt
     4861 gtgctaccat gcctgtttta tatgatgctg gggcaaatac tttactaaca gctctctata
     4921 ctcaacctga gaatgcccta cattttccaa agcaaagctc tgggtggaaa ctaaattatt
     4981 cttcttggtc tttgtcaaaa gtcaagaacc tatctattca actcaggttg ctaatcagct
     5041 agcggttaag agccctgact aggggatttg atgctttctt ctaaccacct cccaccatgt
     5101 cctcttttaa atcttttacc tgctctataa acgtctcctc tgtgtatgtg tgcatgtgtg
     5161 cgtgcgttcg tgcatgtatg tgtgtgtgtg tgtgtgtgtg tgtgtatgta tagtcaatta
     5221 taaaaaatgc taccattagc ggacacaaca gcatacatct atagtcctat ccctcaggaa
     5281 gctgaggcag gaacgtttcc acagtttgtt accatcgggc ttggggtaca taagagtttt
     5341 aggctagcca gcttgggcta cagagggaga ccctgtctgt aaacaaacaa acaatggcca
     5401 aaaccaacaa gaaaacccta aaattgtgcc attaaaaacc atagtgtgct ctctatgaga
     5461 ctaaagagaa tagcagggaa gactagagct gtatttcaag agtgactttc ctccaacctc
     5521 gaaacagttc atagttgtga gaaagagaca ctagaacctt taaggggaga atcctctttc
     5581 ctaacttcag ttgtattggt cctaggacct tgctttggct tcctttcagc tcttcagtct
     5641 tgtggtttcc attggaaaac ttcaagcaag gcatgcagat agcagtgcag gagacagttg
     5701 ggattcatca caaggagcta tttcattgtc agcactggat ataactgtaa aactgaaaaa
     5761 gagaccgaga catggtgatg tagactgtag tccatccact tggaagactg aggcaggaaa
     5821 attctgaggg caagacaaaa ataaactaca cagtgcgatt ctgactcaga aaatccaagc
     5881 aagaacaaca acaaaagctg aagtgagatc aggtaagaat catcttttct ttccttttaa
     5941 atagagatct cagactctat gctcctaagg cttctcctga accctgagat tcatgcctcg
     6001 gtgtccatag taacttcact tataagcagg tgccaccaag cctggctaaa agagtttata
     6061 aggggctggg gatttagctc agtggtagag cacttaccta ggaagcgcaa ggccctgggt
     6121 tcagtccaca gctccgaaaa aaagaaccaa aaaaaaaaaa aaaaaaaaaa agagtttata
     6181 agagagatta taagatgtca aggcccttac caaagtgaca cagggatgga caaaaataaa
     6241 ctacaagaag cttgttggag cttctagaag tgagaagtca caggtctctc tgaaaccctg
     6301 tctgtaatgg acctttgact gttctcaccc acagggccgc tacccgtcac acacccctgc
     6361 tcttcttgtc acccacatgg acactacccg tcacacaccc ctgctcttct tgtcacccac
     6421 atggacacta cccatcacac acccctgctc ttcttgtcac ccacatggac actacccatc
     6481 acacacccct gctcttcttg tcacccacat ggacactacc cgtcacacac ccctgctctt
     6541 cttgtcaccc acatggacac tacccatcac acacccctgc tcttcttgtc acccacatgg
     6601 acactacccg tcacacaccc ctgctcttct tgtcacccac atggacacta cccgtcacac
     6661 acccctgctc ttcttgtcac ccacatggac actacccgtc acacacccct gctcttcttg
     6721 tcacccacag ggccgctacc cgtcacacac ccctgctctt cttgtcaccc acagggccgc
     6781 tacccgtcac acacccctgc tcttcttgtc acccacaggg ccgctacccg tcacacaccc
     6841 ctgctcttct tgtcacccac agggccgcta cccgtcacac acccctgctc ttcttgtcac
     6901 ccacatggac actacccgtc acacacccct gctcttcttg tcacccacag ggccgctacc
     6961 cgtcacacac ccctgctctt cttgtcaccc acatggacgc tacccgtcac acacccctgc
     7021 tcttcttgtc acccacatgg acactacccg tcacacaccc ctgctcttct tgtcacccac
     7081 atggacacta cccgtcacac acccctgctc ttcttgtcac ccacagggct gctacccgtc
     7141 acacacccct gctcttcttg tcacccacat ggacactacc cgtcacacac ccctgctctt
     7201 cttgtcaccc acatggacac tacccgtcac acacccctgc tcttcttgtc acccacatgg
     7261 acactacccg tcacacaccc ctgctcttct tgtcacccac atggacacta cccgtcacac
     7321 acccctgctc ttcttgtcac ccacagggcc gctacccgtc acacacccct gctcttcttg
     7381 tcacccacat ggccgctacc cgtcacacac ccctgctctt cttgtcaccc acatggacac
     7441 tacccgtcac acacccctgc tcttcttgtc acccacaggg ccgctacccg gacactaccc
     7501 gtcacacacc cctgctcttc ttgtcatctt ccttctctgg attttggtgt ctctgtcctt
     7561 aaccttggag tacttcactc ctcctatctt gggacagtga
//
