LOCUS       XM_039097347            1717 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 64-like
            (LOC120098270), mRNA.
ACCESSION   XM_039097347
VERSION     XM_039097347.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097347.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1717
                     /gene="LOC120098270"
                     /note="transmembrane protein 64-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     5 Proteins, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120098270"
                     /db_xref="RGD:41343305"
     CDS             1..1017
                     /gene="LOC120098270"
                     /codon_start=1
                     /product="transmembrane protein 64-like"
                     /protein_id="XP_038953275.1"
                     /db_xref="GeneID:120098270"
                     /db_xref="RGD:41343305"
                     /translation="MSGQFYSILEWRLQAAAAAASGALLGAYLERHGPPAASDLPAPA
                     GALAGGPGSGGGVVVGVAEVRNWRCCCLGSTCWCRSLVLVCVLAALCFASLALVRRYL
                     QHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMVVGV
                     LIGTFIAHVVCKRLLTAWVAARIQSSDKLSAVIRVVEGGSGLKVVALARLTPIPFGLQ
                     NAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQI
                     VISIGLMFYVVHRAQVELNAAIVACEMELKTSLVKGSQPNPSGSSFYNKRTLTFSGGG
                     INVV"
ORIGIN      
        1 atgtcgggtc aattttattc gatattagaa tggcgactcc aggctgctgc ggcggcggcc
       61 tcgggcgcgc tgctcggcgc ctatctggag cgccacggtc cgcccgcggc ctcggacttg
      121 ccggcgccgg ccggggcgtt ggcaggcggc cccgggagcg gcggcggcgt ggtggtcggg
      181 gtggccgagg tgagaaactg gcgctgctgc tgcctcggca gcacctgttg gtgccggagc
      241 ctcgtgctgg tgtgcgtgct ggccgccctg tgcttcgctt ccctggccct ggtccgccgc
      301 tacctgcagc acctcctgct ctgggtggag agcctcgact cgctgctcgg tgtcctgctc
      361 ttcgtcgtgg gcttcatcgt ggtctccttc ccctgcggct ggggctacat cgtgcttaat
      421 gtggcggccg gctacctgta cggcttcgtg ctaggcatgg ggctcatggt ggtgggcgtc
      481 ctcatcggca cctttattgc tcatgtggtc tgcaaacggc tgctcaccgc ctgggtggcc
      541 gccaggatcc agagcagcga caagctgagc gccgttatcc gtgtcgtgga gggaggaagc
      601 ggcctgaagg tggtggcgct ggcccggctg actcccatac cttttgggct tcagaatgca
      661 gtgttttcga ttactgatct ttccttaccc aactatctga tggcgtcttc agttggactg
      721 cttccgaccc agcttctgaa ttcttacttg ggaaccacac tacggacgat ggaagatgtc
      781 attgcagaac aaagtgttag tggatatttt gtcttttgtt tacagattgt tatcagcata
      841 ggcctcatgt tttatgtagt tcatcgcgct caagtggaat tgaatgcagc tatcgtcgct
      901 tgtgagatgg aactgaaaac ctctctggtt aaaggcagtc aaccgaatcc cagtggctct
      961 tccttctaca acaagaggac cctcacgttt tctggaggtg gaatcaatgt tgtatgactc
     1021 ttacaaactg tgattgtcga gcgcctactc tgctgtccgg gcctagcagt cacttaccta
     1081 atggcagaga caagtgccgt tgtattatgg cacaagcaaa actgactagt ttttaaattg
     1141 cacaattttc taaaagcaag aatcattttc tgggtctgta aatgtagatg cagctttggc
     1201 tgccccttgt catacctgta atggcctata ggtgtgcact ttagtgtttt tgaattattt
     1261 tattgctggg acttatgaac agagaaataa cccaaatttt tttttctgtt tagtatcttt
     1321 atttataaag cccatgaata gttgtgtgca tctgtcttta aagatgagta aaaatgtaca
     1381 gttctcagtg gctcactgtt ggatgttctt tgctttggca ttctgtccag aagggtaaac
     1441 tgttttgttt attgttcact tgtttgtttc aagcaggaaa acttcgcttt acttttcttg
     1501 cttgtaagag aatagatgta ctttggtcga atgtatgtca gcattatgtc actgtgggcc
     1561 atttacaact ttgcgtacaa gcgtaaatcc tacattgtgg gactgaagtg ctcttaagac
     1621 cccttttatt ttcactgtgt aatatgcaaa gtgaaaggga cattatttag caggcgactc
     1681 acaagtcgag cctgcattct tatttgatta tcctgtt
//
