LOCUS       XM_039097271            1089 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus oocyte specific homeobox 2 like 2
            (Obox2l2), mRNA.
ACCESSION   XM_039097271
VERSION     XM_039097271.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1089
                     /gene="Obox2l2"
                     /note="oocyte specific homeobox 2 like 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:120098147"
                     /db_xref="RGD:41244685"
     CDS             1..1089
                     /gene="Obox2l2"
                     /codon_start=1
                     /product="oocyte-specific homeobox protein 5-like"
                     /protein_id="XP_038953199.1"
                     /db_xref="GeneID:120098147"
                     /db_xref="RGD:41244685"
                     /translation="MVTEEGRKDFLCLEPKGQETQKNVTIVFHTFNSGTGLGLYRNIL
                     LSVQNTDITESPSFYPKFQLSSYTPMDTSSQLPQEPAWNLAFQMGQSPLVTSRTPMQS
                     SPSVPEQNLNWQESQGSSRESKPMALSDKYGGKQTGPVAPRKRRKERTQYSEKQKSVL
                     QEHFAECQYPDKKLCLELASLIRVTEKEIKVWFKNNRAKCKQKNVPEALPEKNGGPEA
                     VSGSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPE
                     DVLDGNDPVTAGDSGVSAPVEAQADLAPAGAPVAIAVDTQNPEECEDLPLLDEGVWQW
                     MLEDFHQLEDWFTKNYIESPSSTSHPLD"
ORIGIN      
        1 atggtcacag aagagggaag gaaagatttc ttgtgtttgg aacccaaagg acaggagacc
       61 caaaagaatg tcaccattgt gtttcatacc tttaattcag gcactggatt gggtttgtac
      121 aggaacatac tcctatcagt tcagaacaca gatatcactg aaagtccctc attttatcca
      181 aaattccagt tgtcttcata tacccccatg gacaccagtt ctcaattgcc tcaagagcct
      241 gcatggaact tagcttttca aatgggccag agtccccttg tgacctcaag aactccaatg
      301 caatcaagtc cttcagtgcc tgaacagaac ctaaattggc aagagtccca agggtcatca
      361 agagaatcaa aacctatggc actgtcagat aaatatggcg gtaaacaaac tggccctgtg
      421 gctccaagga agcggcgaaa ggaacgcact cagtactctg aaaaacaaaa gtccgtgctg
      481 caagaacatt ttgctgagtg ccagtaccca gacaagaaac tgtgtttgga gctggcatcc
      541 ttgattcgtg tgacagagaa ggagatcaag gtctggttca agaacaaccg ggctaagtgc
      601 aaacagaaga atgttccaga agcactgcca gagaaaaatg gaggccctga agctgtttct
      661 gggtcaaccg attttcctgg ttccatagct gttgttggtt gtgaccaggg agagcccatg
      721 gccacagcca ttttggatgt ggattccact cccaaactga actgcagcca ggagtcttct
      781 ctggatggca attggaccta tgatggtgcc atgtgttgtc tgccagaaga cgtgcttgac
      841 ggtaatgacc ctgtcactgc tggagactct ggtgtatcag caccagttga agcccaggct
      901 gaccttgcac cagctggagc tccagttgcc atcgcagttg acacccaaaa cccagaggag
      961 tgtgaggatt tacctctatt ggacgaaggg gtctggcaat ggatgcttga agactttcac
     1021 caattggaag actggtttac caagaactac attgagagtc ctagcagtac ttctcacccc
     1081 cttgactag
//
