LOCUS       XM_039097263             990 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus homeobox protein ceh-37-like
            (LOC120098145), mRNA.
ACCESSION   XM_039097263
VERSION     XM_039097263.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097263.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..990
                     /gene="LOC120098145"
                     /note="homeobox protein ceh-37-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:120098145"
                     /db_xref="RGD:41181416"
     CDS             1..990
                     /gene="LOC120098145"
                     /codon_start=1
                     /product="homeobox protein ceh-37-like"
                     /protein_id="XP_038953191.1"
                     /db_xref="GeneID:120098145"
                     /db_xref="RGD:41181416"
                     /translation="MHANVLYRNILLSVQNTDIAEGPSFYPKFQMSSYTPMDTSSQLP
                     QEPAWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESKPMVLSDKYGGK
                     QTGPVAPRKRRKERTQYSEKQKSVLQEHFAECQYPDKKLCLELASLIRVTEKEIKVWF
                     KNNRAKCKQKNVPEALPEKNGGSEAVSGSTDFPGSIAVVGGDQGEPMATAILDVDSTP
                     KLNCSQESSLDGNWTYDGAMCCLPEDLLDGNAPVTAGDSGVSAPVEAQADLAAAGAPV
                     AMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSTSHPLD"
ORIGIN      
        1 atgcatgcaa atgtcttgta caggaacata ctcctatcag ttcagaacac agatatcgct
       61 gaaggtccct cattttatcc aaaattccag atgtcttcat atacccccat ggacaccagt
      121 tctcaattgc ctcaagagcc tgcatggaac ttagcttttc aaatgggcca gagtcccctt
      181 gtgacctcaa gaactccaat gcaatcaagt ccttcagtgc ctgaacagaa cctaaattgg
      241 caagagtccc aagggtcatc aagggaatca aaacctatgg tactgtcaga taaatatggc
      301 ggtaaacaaa ctggccctgt ggctccaagg aagcggcgaa aggaacgcac tcagtactct
      361 gaaaaacaaa agtccgtgct gcaagaacat tttgctgagt gccagtaccc agacaagaaa
      421 ctgtgtttgg agctggcatc cttgattcgt gtgacagaga aggagatcaa ggtctggttc
      481 aagaacaacc gggctaagtg caaacagaag aatgttccag aagcactgcc agagaaaaat
      541 ggaggctctg aagctgtttc tgggtcaacc gattttcctg gttccatagc tgttgttggt
      601 ggtgaccagg gagagcccat ggccacagcc attctggatg tggattccac tcccaaactg
      661 aactgcagcc aggagtcttc tctggatggc aattggacct atgatggtgc catgtgttgt
      721 ctgccagaag acttgcttga cggtaatgcc cctgttactg ctggagactc tggtgtatca
      781 gcaccagttg aagcccaggc tgaccttgca gcagctggag ctccagttgc catggcagtt
      841 gacacccaaa acccagagga gtgtgaggat ttacctctat tggacgaagg ggtctggcaa
      901 tggatgcttg aagactttca ccaattggaa gactggttta ccaagaacta cattgagagt
      961 cctagcagta cttctcaccc ccttgactag
//
