LOCUS       XM_039096383            1227 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ral guanine nucleotide dissociation
            stimulator-like (LOC120097886), transcript variant X1, mRNA.
ACCESSION   XM_039096383
VERSION     XM_039096383.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096383.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1227
                     /gene="LOC120097886"
                     /note="ral guanine nucleotide dissociation
                     stimulator-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:120097886"
                     /db_xref="RGD:41373608"
     CDS             62..871
                     /gene="LOC120097886"
                     /codon_start=1
                     /product="ral guanine nucleotide dissociation
                     stimulator-like isoform X1"
                     /protein_id="XP_038952311.1"
                     /db_xref="GeneID:120097886"
                     /db_xref="RGD:41373608"
                     /translation="MFSCCPWTTEGSGLRKDKNEGQVGTLKFMILSCLHCLWPFAQKD
                     TDLTQDNQGQDYANEGEHECAPKVVTEPCRESRISADMVENLVNRLVSSLQDGDPSFV
                     PAFLYTYQQFTTTQHALDLLLKRFAYFYLDCEEDKHIKSTLCCFLDTWIDQYPEEFSQ
                     TILKKLKTYLTVNMPSSDLNVRVHMLLKELRQESNESEGKGEDSVSLPVTFLYKTESA
                     ADLSSSVEVRSYTSGDLEMEAWFPSGNVQPEPAYLQETETPESTIKVISWD"
ORIGIN      
        1 cagccaactg cttacacaca gcccagcagg ctcacttgtc caagagctta gagagagcag
       61 gatgttctct tgttgtcctt ggactactga aggctcaggc ctgaggaaag ataaaaatga
      121 aggtcaggta gggaccttga aattcatgat tctttcttgc ctacactgtc tctggccatt
      181 tgcccagaag gatacagact tgacccagga caaccagggc caggactacg caaacgaggg
      241 tgagcatgag tgtgccccaa aggtcgtgac ggaaccctgt agagagtccc gcatcagtgc
      301 agacatggtg gaaaatctgg tgaatcgact ggtgtcatct ctgcaggatg gggacccctc
      361 ctttgtccct gccttcctgt acacttacca acagttcacc accacacagc atgcgctgga
      421 tctgctgttg aagaggtttg cctacttcta cctggattgt gaagaggata aacacataaa
      481 gagcactctc tgttgcttcc tggacacatg gatagaccaa taccctgagg agtttagtca
      541 gaccattctg aaaaagttga agacctactt gactgtgaac atgccctcct ccgatctgaa
      601 tgtccgtgtc catatgctcc tcaaggagtt gcggcaagag tccaatgagt cagagggaaa
      661 aggtgaagac tcagtttcac tgcccgttac ctttctctac aagactgaat cggctgcaga
      721 tttgtcttca tctgtagaag tgaggagcta cacctctgga gatttagaaa tggaagcgtg
      781 gtttccatca gggaacgtgc agccagaacc agcttatctg caagagacag agaccccaga
      841 atccaccata aaggtcatct cttgggacta gatgggacag cagcagccca gccagcatac
      901 gggctagcag ctgtggaacc tgtgtctcac cgtgtcagcc gacacaatgt ccttcttgca
      961 tcttctcccc ttctcgacct tgtcctatct ccttagagaa tgaccctgtc attatcacct
     1021 gaggggtctc ttatatctgc tctgcagaca gcacctgtct gacgtactgg cagaaccatt
     1081 ccctgatttc aatatagcaa cttcccttgc cccacagcca gccctcacct ccccctgaga
     1141 aatggccttt ttacttctgt ggttcttttt atgttgcttt tcttttaagt atttgtttta
     1201 ataaattgtt agtactcctt ttttgtt
//
