LOCUS       XM_039096321            5154 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus spermatogenesis-associated protein
            31E1-like (LOC120097801), mRNA.
ACCESSION   XM_039096321
VERSION     XM_039096321.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096321.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5154
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5154
                     /gene="LOC120097801"
                     /note="spermatogenesis-associated protein 31E1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:120097801"
                     /db_xref="RGD:41180815"
     CDS             1727..5038
                     /gene="LOC120097801"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 31E1-like"
                     /protein_id="XP_038952249.1"
                     /db_xref="GeneID:120097801"
                     /db_xref="RGD:41180815"
                     /translation="MLYSTGQWPVTCTVVQNMESFLNLMNSIIYSWVSPSTIDTAIDM
                     SIAILCGAGLYFLLTPFLKNLPVSPCESETDITEDLKMRQRKTRMKITTVKGCREDGK
                     NVEETKIPSRPMKIKQLPQDSTWRPWWNPLQKMEHLPLFQLLSYLKFLEYLIHKEFSH
                     IFWGISTLFSESVLATAHIFRSPSSTEHKTMRFCDACHPGQAPSQAQGPPECSQEQPL
                     PAQLVTPSLLAVTKAQLMQIFPSSTPIKTPPCFKRQAFRKPYPTSDKGIQVSLSTEKH
                     AWQHGQYWNPTEGDDIQKHQAAFMRPTQNLTLHSEAIRSGSILPEHWQMAHKNEGPQN
                     EGKETNVGQEQGTPIIFLPSWRLAQLQGNFPAYSHYCKSRPLLSQSVHSSILDHKRYT
                     WIKMRGSVPVEVPLREVIEKSEKHTTIKKGIGLGSKHLPCTSSSIHKKGLNPSIPTLR
                     SDELSYMNPAEYLSMDDSNTERKLALDITELPVKHRRKSYLQILETEDLTTPGVPASN
                     LPQVVFPSSPICDSKEEYYSKAATILENLHHQDPGGTRVESALAARLESALCMHSAAE
                     VQENQRAPQPDASHGPSKAHPDSWQSHLSSQQPDFCLQAQPQQNRTIQGSETGSLQQN
                     TSIKIDKYLPWKGFQYVDSSQPCCRVIVLGQDETIPPSAAKPSNRVEVKEEPSAWTVS
                     LGSSEVHNGQSINISRRDFESSQPNQHPGHLQTPTLQHSEDSVQKPQSHSKIDLKSKE
                     QAQPWPVSHDPDVPSTVHLAKVSLPSQHLMPSFQITCQNPITTLALSEDLVKRHEMLE
                     TGEICVPKEKIEVKDFKGSHPQKEKQITIRSRAISQGERLRRVSPSIQSSTQITDTTK
                     TWIPGKGEVTSKSPWDNITGTASKYRTSGTKYIGQGDFLENVLPTSGTKQIQEVVTKN
                     KVLYNTVAEIQSLVNALVRITENTEEYQSKVLGCKVESLTSQLDDPSHTPVGLHDTIH
                     SRAVNRLSCDHVSPEIINFPFTYTGIEDQLQSGIEAQRACDPGKITTKVGIGCWPHSS
                     LEGHNHSFRYREITDKQQSGIVHKAFDTHQNTKKGMGCACFLSPKENHPVSQTGTDWS
                     SHSVAAQQASDTRYT"
ORIGIN      
        1 cttcagataa attcaacttc agaatataaa atgaactcaa gaaagtagcc accaacaacc
       61 aaaataagtc accaaattat aagggacaaa ttataagagg ataacagaga agacacaaca
      121 gagaactttc aatatcctta gccatcagat agattcaaat tagggaaaca ttgagattcc
      181 attttaccta acaacaatga ctgagatcaa aacaaaagag aaacttggcc aaagattaag
      241 gaagggaccc atcaggaact gttaactggt gtgtgaactg gagaagcatg ggggaaatca
      301 gtacagacat tcctaaaagc agaactacca tgggcccagg gataccgttt ctgagcatgg
      361 actcaaagga tgtggtctat gacaagggat acgtgcacag ccatgttgat tgtggtacca
      421 ctcccaacaa caattaaata gttaaaaata cctaaattac ttctactaga gtttggtaac
      481 taagaaaact gaacatgtca agaaggaaaa cactactaag catggcaatt atcatagaag
      541 gtttagttca gaattaccca cgtgctttct tatgattcgg aaatgaattt cattatcctt
      601 accatcctat accagaagac aataaaagta cattgttttt ttgattatac tgaacaatga
      661 caaagctaaa taaataggag aaaatggaag tttaatgtct gaatggagat gagctgtgat
      721 cacataatgg acaaacatga atctacagaa aaacacaacc ctacagaaag aattcataag
      781 aaggaaacat aagttccaca gagaagctca ttttctgaaa aactaagaac caatggacct
      841 gagcagatat cttccagaag acaaaggtaa agtgtaaatt ttgggtttct ttggagaccc
      901 aggcagatga tactaatgtt ttgctggggc agacagggga aagaatgctt tgctacagcg
      961 gacacatgaa agaatgtttg cctgaagcag acacaggaga cacatgaaag gaaacatgat
     1021 atttagaagg aatattgata agaccccaga gacaatggga tctctggctt tggttcacct
     1081 tactctgcct tcctagtcat tgctgaagaa aagcttgtat tggtccacct tacactgcat
     1141 tcctaagctt ctcctgggga ttcatctgag aagactcacc aaagaacctc gaggattctt
     1201 gccatcttat tagacttggg cccaacaggc cagcctccca gattcttctg aatagaactg
     1261 cccctgctga ttcatgtgtg gtgtctgtga gtagacagca ctgaagctgc taattcatgt
     1321 ttggtgttta ctagggaact gaactgagta caaggaagat tgaaatgtcc caaaagaact
     1381 atttccaatc agctccctgt ccccccatat cctaataaca ttcctctttc actggtgggt
     1441 ggagggtcag aggggagggt gaaatcttat aaaagtaggt tgagcaaaac atatgcctac
     1501 accgagaaat actggtgctc agaaagaagg gacaaaatat ggacagaggt ctatttgtgc
     1561 ctgatacagc aacaggatta ggaagaaggg aaagggaaaa gacacagcag gtaaccctgg
     1621 catggaggct ggggaggggc agtggcaccc tctcccctgg caggggccct ttgtgatgag
     1681 gagaccacag ctgtgtgatg tggcctgagc ccccttgaaa agtcacatgc tatacagcac
     1741 aggtcagtgg cctgtgacct gcactgtggt tcagaacatg gagagctttc tcaatctgat
     1801 gaatagcatt atttactcgt gggtgagccc cagcaccata gacacagcaa tagacatgag
     1861 cattgccatt ctgtgtggag ctgggctcta tttcctactg acccccttcc tgaagaacct
     1921 ccctgtgtca ccatgtgaaa gtgaaacgga catcacagag gatttgaaga tgaggcagag
     1981 aaagaccagg atgaaaatca ctactgtcaa aggttgcaga gaagatggaa agaatgtgga
     2041 agagaccaag attccatcac gacctatgaa aatcaagcaa cttccccagg actccacatg
     2101 gcgtccctgg tggaaccctc ttcagaaaat ggaacacctt cctctctttc agttgttgtc
     2161 ttatctcaag ttcttggaat atcttataca caaggaattt agtcacattt tctggggcat
     2221 atccactctg ttctctgagt cggtcctggc tactgcccac atcttcagaa gcccttcctc
     2281 aacagaacat aaaaccatga ggttttgtga tgcctgtcac cctggccaag ctccttccca
     2341 ggctcaagga cctccagagt gttcccaaga acagccattg cctgcacaac ttgtgacacc
     2401 aagcttgtta gctgtgacaa aggcccaact aatgcaaatc ttcccaagct ctacaccaat
     2461 caaaacacct ccttgtttca agaggcaggc ctttagaaaa ccatatccta ccagtgataa
     2521 agggatacag gtatccctat caacggaaaa acatgcctgg caacatggac agtattggaa
     2581 ccccaccgaa ggtgatgata tccaaaaaca tcaggcagcc tttatgagac caactcaaaa
     2641 cttgacccta cacagtgagg ctatcaggtc aggctccatc cttcctgagc attggcagat
     2701 ggcccacaaa aatgaggggc cacagaatga agggaaggaa actaatgtgg gacaagaaca
     2761 aggaaccccc atcatattcc tcccatcctg gaggctggcc cagcttcagg gaaattttcc
     2821 agcatacagt cattattgca agagcaggcc tctactctcc caatctgtcc actcatccat
     2881 cctcgaccac aaaaggtaca cgtggatcaa aatgaggggg tctgtgcccg tggaggtccc
     2941 cttaagggag gtcatagaaa agagtgaaaa acataccacc atcaagaagg gcattggtct
     3001 tgggagcaag cacctgcctt gcacttcaag cagcatccat aaaaaggggc tgaatcctag
     3061 tattcccaca ctaaggtcag acgaactgtc ctacatgaac cctgctgaat atctttccat
     3121 ggatgactca aacactgaaa ggaagctggc attagatatc acagaacttc cagtcaaaca
     3181 cagaaggaaa tcatatctgc agatccttga gacagaggat ctcaccacac ctggagttcc
     3241 agcctcaaac cttccccagg ttgtgtttcc ctcctccccc atctgtgatt ccaaggagga
     3301 atactactcc aaggctgcca caatcctgga aaatttgcat caccaggacc caggagggac
     3361 aagggtagaa agtgcgttag ctgccaggct agagagtgct ctgtgtatgc actcagctgc
     3421 agaggtgcag gagaaccaaa gagcccctca acctgatgcc agccatgggc cctcaaaagc
     3481 tcatccagat tcatggcaga gtcacctgag tagtcagcaa cctgatttct gcctccaggc
     3541 tcaaccccag cagaaccgga ccatccaagg aagtgaaaca ggcagtctcc aacaaaatac
     3601 aagcataaaa attgacaagt atctaccatg gaaggggttt cagtatgtgg actcatctca
     3661 accctgctgt cgtgtgatag tgcttggtca ggatgaaacc attccaccct cagcagccaa
     3721 accaagcaac agagtggagg tgaaagaaga gccatctgca tggacagtga gtctgggatc
     3781 cagtgaggtt cacaatggcc aatccatcaa tatcagtcgc agggactttg agtcttcaca
     3841 gcccaaccaa catcctggtc atctgcaaac acctacccta cagcactcag aggactctgt
     3901 ccaaaaacca caatcacaca gtaagataga cctgaaatca aaggagcagg cacagccctg
     3961 gcctgtgagt cacgatccag atgtccccag tacagtacac cttgccaagg tcagcttgcc
     4021 ttcacagcac ctaatgccca gctttcaaat tacatgccaa aaccccataa ctaccctggc
     4081 tttaagtgaa gatttagtga agagacatga aatgctggaa actggagaga tatgtgtccc
     4141 aaaggaaaaa attgaagtga aagatttcaa ggggtcccat ccccagaaag agaagcagat
     4201 tactataaga tctagagcca taagccaggg agaacggctc aggagggtaa gtccttccat
     4261 ccaaagctcc acccagatca cggatacaac caagacttgg attccaggga aaggggaggt
     4321 tacttcgaaa agtccttggg ataacatcac agggactgct tcaaaatatc gaacctccgg
     4381 cacaaaatac attggacagg gggatttctt agagaatgtt ctccctacct caggtactaa
     4441 gcaaatacag gaggttgtaa caaaaaacaa ggtcctctac aatacagtag ctgaaataca
     4501 atcacttgtg aatgctctcg tccggatcac ggaaaacact gaagagtacc aatcaaaggt
     4561 actagggtgt aaagtggagt ccctgacatc ccagctggat gacccatccc acactcctgt
     4621 gggtctgcat gatacaatcc acagcagagc agtaaacaga ctgagctgtg atcatgtcag
     4681 ccctgagatc attaacttcc cctttacata tacagggatt gaagaccaac tacagtcagg
     4741 gattgaagcc cagagagcct gtgacccagg taaaattaca acaaaggttg gaataggctg
     4801 ttggccacat agcagcctcg aggggcacaa ccattccttc agatacagag aaattacaga
     4861 caaacagcag tcaggcattg tccataaagc ctttgacact catcaaaata caaagaaagg
     4921 aatgggctgt gcctgctttc tgagtcccaa agagaaccat ccagtcagtc agacgggaac
     4981 tgactggtcc tcacattcag ttgctgccca gcaagcctct gacaccaggt acacctgacc
     5041 aggacagggc aaggagcagg tggctctggc catccttttt ctagaaggtg tcccatctac
     5101 ccatccattg tgtcccccat gcttcctggt aataaacttg gttttgtacc tgca
//
