LOCUS       XM_039096151            2264 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus translation initiation factor
            IF-2-like (LOC120097728), transcript variant X6, mRNA.
ACCESSION   XM_039096151
VERSION     XM_039096151.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2264
                     /gene="LOC120097728"
                     /note="translation initiation factor IF-2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 5 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120097728"
                     /db_xref="RGD:41058243"
     CDS             122..1147
                     /gene="LOC120097728"
                     /codon_start=1
                     /product="translation initiation factor IF-2-like"
                     /protein_id="XP_038952079.1"
                     /db_xref="GeneID:120097728"
                     /db_xref="RGD:41058243"
                     /translation="MTRSRGCPRCKLRAHTRLRGASPSNSPRLPTLGEPMGHPPTKVE
                     VSYSLLVPVAFSLKKQNKTKNPNNNNKNNNKNNNKKLCSQAKEECVSLAHPRKSIPRA
                     AAPLAAAPCARRAASPLPHPPHSRPRAPAQLHYLSSARASGPGNNFPKPKEPKRGACT
                     QPRARRDSGCPGVPTCLCCFPARRRRVHAHTRPVAAARSRQSVPGPRRAPQAPGSNPL
                     SARLTAAPRVPIPARPRARGAQLSRGRPTRRAAPAPAHTRARSTRSRHATGPRPPVLS
                     RPRPPRSPRPPAASLFPAAAACAEGGSRAGRRRGAARVEKVRKEATAAPPAGGKVAGR
                     GGGMRRG"
ORIGIN      
        1 gcatgaggaa ttccttatat agccgcggcc gcggcagcac agggctgtgg ccgcccatca
       61 ccacacacag gtacccgggc gggggcatcc cccggccgcc gccgcaggga ctgtccagac
      121 aatgaccagg agcagaggct gtccgcgctg caagctgaga gcacacactc gcctaagagg
      181 ggcatcaccc agcaactccc cgcgtctccc cacgctggga gagcccatgg ggcacccacc
      241 gacaaaagtc gaggtgtctt attctctcct agtgcctgta gctttttctc ttaagaaaca
      301 aaacaaaaca aaaaacccca acaacaacaa caagaacaac aacaagaaca acaacaaaaa
      361 actctgcagc caggccaagg aggagtgtgt ttccctggca catccgcgga aatcaatacc
      421 ccgcgcagct gcaccgctag ccgcagcccc gtgcgcccgt cgggccgcca gccccctccc
      481 ccacccgccc cactcgcgac cccgtgcgcc agcccagctc cattatctgt cctctgctcg
      541 cgcgtcgggc ccaggtaaca acttccccaa accgaaagag ccaaagcgag gcgcatgcac
      601 acagccccgt gcccgccggg actcgggctg tccgggtgtc ccgacctgtc tgtgctgttt
      661 cccggcccgc aggcggcgag tccacgcaca cacacgccct gtggcagcag ccaggagccg
      721 ccagagcgtg cccggccccc gacgggcacc gcaggcgccg ggttccaacc ccctgagcgc
      781 ccggctcacg gcggccccgc gcgtccccat ccccgcccgc ccgcgagcgc gcggggcgca
      841 actttcccgc gggcgcccga cccggcgcgc agcgcccgct cccgcgcaca cgcgcgcacg
      901 gtcgacacgc agccgacacg caactggccc gcgaccgccc gtcctctccc gcccgcgccc
      961 gccccgcagt ccgcgcccgc ccgccgcaag tttgttcccc gccgccgcgg cctgcgcgga
     1021 gggaggatcg cgcgcgggga ggcgccgagg ggcagcaaga gtggagaaag tgcggaaaga
     1081 agcaacagcc gctccacccg cgggcggaaa agtggccggg cgcggcggcg ggatgcggcg
     1141 cggctaacgg tccccggcgg ccgcccgagc cgctaggcgc agaggcagat cccaggtgta
     1201 gggcaggagc tctagaacag tccagtggct ttgcctctgc atctgtctgt gcctctgtct
     1261 cattctgttt cctgctgtgc gtggacatgg atggcccaga aagagacctt ggaacacaca
     1321 gctccgtgat gccgcagcaa gcgatacccg ataccagaag gaaacaggac gaggaaggca
     1381 cttggccctc ttgatttcca ggctgcctga tagctgccac agttcattac ccaggaaaat
     1441 tgcttgaact ctgggaaaat gggtgctgga gatataccat agtctcctca ctacggtggg
     1501 tgtaggaaca gaggcccgac tggagggtga tgtagaaggt attcacagag cctgctaatg
     1561 cataataacc caacatcaca tacaaggatg tgccaaagca tcaaagggtc ctttccagat
     1621 cgggtatgct aagtgaagca agccaagcac tggaaagcag cgccacacgg tctcaccggc
     1681 aggggaaatc gtaaccagct gaggtgggga gcatcaggga cggcaagagg cagatgactg
     1741 ggttctgagc atgaggcaag atcttctgta agctttggcc tactgtgggc atgagaacct
     1801 agtgctcaaa ggtgacatct ttgcatcccc ctttgtggct gaatgaggct ctgttgcgct
     1861 tcctgtatgt gttccctcct ctggatgcct aggctggttc tacagttgtc taccagaaca
     1921 gagcagcaat gtctacagtt tccaaggaaa agaatagctt ttcttcaaag cctcaccatc
     1981 agaacggcat cagagcagaa ggggcccagc cttagaaatc ccatttgaga gccagcgtgg
     2041 agtcctgtgg ctgttttcta ctgcaaactg atgtatcctg ggtcattatg ctaatcacag
     2101 tgattaaatg actatatact tcacttggtg ccacactcct ataattctaa ctcctggggc
     2161 agctgaagca ggaagatcag gccccggaat tcaaggccag tctgggcagc acaataacat
     2221 tatgtctcta aaacaaaaat aaaactgttg aaaatttttt ctca
//
