LOCUS       XM_039095439             936 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus retinoic acid early-inducible protein
            1-gamma-like (LOC120097698), mRNA.
ACCESSION   XM_039095439
VERSION     XM_039095439.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095439.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..936
                     /gene="LOC120097698"
                     /note="retinoic acid early-inducible protein 1-gamma-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins, and 51% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120097698"
                     /db_xref="RGD:41215982"
     CDS             1..807
                     /gene="LOC120097698"
                     /codon_start=1
                     /product="retinoic acid early-inducible protein
                     1-gamma-like"
                     /protein_id="XP_038951367.1"
                     /db_xref="GeneID:120097698"
                     /db_xref="RGD:41215982"
                     /translation="MAKRATTKCNLSLNLGLLVLLNFLGTAILEDVHSLSCNLIIRSP
                     TKGEPLWYEGQCSVDGIDFLSSNNVNKSRPLGNQEKMANATEVWTCVTQWIELLGQDL
                     RDKVSEIKVHTTKTSGHPTLWVTMLSKYSHGQIISASWEFNISENYSFILDLKTMKWK
                     LINPVPGDIMKEWKDDETLMKHLNLSIAECSKKFNEFLNQHEERTSRSTRAPDITQPP
                     PASQVPYKEVLIPVGLIISIIFIIFICLCVKRMCCTQGGEEQRGVSSCPW"
ORIGIN      
        1 atggcaaaga gagccaccac caagtgcaat ctttctctga atctgggcct tttggtgctg
       61 ctgaattttc tggggaccgc gatactagaa gatgtacact cccttagttg caacttgatc
      121 atcaggtctc ctaccaaggg agaacctctc tggtatgaag gacagtgttc agtggatgga
      181 attgatttcc tttcttctaa taacgtgaac aagtccaggc ctttgggtaa ccaggagaag
      241 atggcaaatg ccaccgaagt gtggacatgt gtgacccagt ggatagagct attgggccag
      301 gacttaaggg acaaggtgtc tgaaatcaaa gtgcacacaa ccaagaccag tggtcacccc
      361 actttatggg tcaccatgct ttctaagtac agccacggac aaatcattag tgcttcctgg
      421 gaattcaaca tcagtgagaa ttattccttc atcttggacc taaagactat gaagtggaaa
      481 ctgattaatc ctgtaccagg cgacatcatg aaagaatgga aagatgatga gacattaatg
      541 aaacatctga atttgtccat agcagaatgc agtaaaaaat tcaatgaatt cttaaatcag
      601 cacgaggaaa gaacaagtag atcaacaagg gccccagata tcacccagcc tccacctgcc
      661 agccaggttc cttataagga agtattgatc cctgtgggac tcatcatctc catcatcttt
      721 attattttca tttgcttatg tgtgaagagg atgtgttgta cccaaggagg tgaggagcag
      781 cgtggggtct catcctgtcc ttggtagttt tgtttgtcag gggacttgca ataggtgtct
      841 cactgagtta cagatggttt cgagtactgg gagctgaacg cagaacctct ccaagaacag
      901 caagggaact tctgagcctt ctctcaaacc ctcgaa
//
