LOCUS       XM_039095159            2278 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus translation initiation factor
            IF-2-like (LOC120097506), transcript variant X1, mRNA.
ACCESSION   XM_039095159
VERSION     XM_039095159.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2278
                     /gene="LOC120097506"
                     /note="translation initiation factor IF-2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 132 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120097506"
                     /db_xref="RGD:41133681"
     CDS             33..1046
                     /gene="LOC120097506"
                     /codon_start=1
                     /product="translation initiation factor IF-2-like"
                     /protein_id="XP_038951087.1"
                     /db_xref="GeneID:120097506"
                     /db_xref="RGD:41133681"
                     /translation="MGLVHAEATLTAKPQADTMQHTVLPTMHRLSSVTHMHTHSPLHR
                     EGAGARPAGAPRRPLQPHTHLEVAQSAVPPWRPRRLEPSSRRPQRATPGRDQPAPNKG
                     CEQAAGAACIPAPRRGGGSGGGAGAPGGSGARSLRAARSEGAPAPALPLAAVRHRRRC
                     PATAPHTSIIHRPSPASRAKPITGGGSANGAAAAAEEAASRAPGRKRQPFGDGDGDRG
                     RAGGRGRTGRAGETSHGRLRCAALPDPAGVTTQPACRRVGPGAPGKPGARRRGGGEGG
                     GAREDDERRAALCRRLRGALPAPRAGRPHPRPAARSPQPAARSPHSLACAARQPSHFT
                     ARD"
ORIGIN      
        1 ggtgaaccaa ggaacctctg tgggtgaaca aaatgggcct ggtgcacgct gaagccactc
       61 ttacagccaa gcctcaggca gacaccatgc agcacaccgt gctacccaca atgcaccggc
      121 tctcctctgt cacacacatg cacacacact cacccctgca ccgggaggga gccggggccc
      181 ggcccgcggg cgccccgcgc cgacccctcc agccccacac tcacctagaa gttgcacagt
      241 ccgcggtccc gccctggcgc ccccggaggc tggagcccag ctcgcggcgg ccgcagcgag
      301 cgactccggg cagggatcag ccggcgccga acaaaggctg tgagcaggca gcgggcgccg
      361 cctgcatccc cgctccgcgc cggggcggcg gcagcggcgg cggcgcgggg gccccgggcg
      421 gctccggcgc ccgctcgctg cgcgctgccc gctccgaggg cgctccggct cccgcgctcc
      481 cgctcgctgc cgtccgccac cgccgccgct gtccggctac cgcaccgcac acatcaatta
      541 ttcatcgccc gtctccagct tcccgggcaa agccaatcac aggcggaggt tccgctaatg
      601 gggccgccgc cgccgccgag gaggcagcca gccgcgcgcc cgggcgcaag cgacagccct
      661 tcggggacgg ggacggggac cgggggcgcg cgggggggcg ggggcgcact gggcgcgcag
      721 gagaaacttc ccacggccgg ctgcgctgcg ccgcgctccc ggaccccgcg ggcgtgacca
      781 cccagcctgc gtgccgccgc gtggggccgg gggctccggg gaagccgggc gcgcggcgac
      841 gggggggagg ggagggagga ggagcgcggg aggacgatga aaggcgagcg gccctgtgtc
      901 ggcgtctccg gggagccctc cccgccccgc gagccgggcg cccgcacccc cgccccgcag
      961 cccgcagccc gcagcccgca gcccgcagcc cgcactcact cgcgtgcgca gcccgccagc
     1021 ccagccactt cactgcgagg gactagtgac tggggatcgg aggcagctca catttcaaac
     1081 ttgcacgcag gggtggtgct ggtgcacgcc gccgctagag cgaacgcacg acccgacgag
     1141 tgcagctcca gcctccgggc gggggcggcg accaggcccc tctccctccc ccgcccgggc
     1201 aattaattgg aagcaacact tgtgagagtg gggctcctgg cgcgctgtcg cccgaggggg
     1261 cctctgggaa ggcgctggcg gtggttgact ccgggtgcct ttcgcccccg aatcttccca
     1321 agtggtcatg ctaatgaggg tccttagcgg ggccccggtg gcctctgtcg ggtaaggggc
     1381 ggggcaggct ggggacatcc agttacaacc agggtttaaa agggatttct ggacgggtta
     1441 gaggggacgg agatcaggag cttgacatct ttttttcctc cctccatagg ggttccctgt
     1501 aggccctggc attcctcgaa cgccgggtcc agggtaggtg gactggcgca cgtacgctct
     1561 ggttttccga ctttggggag ttcctgtgct ccgcagccag cggcaggagg gaaatcggag
     1621 gcggcagttg tgcacagccc cgcccctgct cccggtgctg ctgtcttcct gactctgcat
     1681 cctgtggtgg ccgcggcctc ttccttccag ccagtagtgg ctctcttctc tggaatcaaa
     1741 tccctcaagg ccctcatggt tagcagcctt tttaggattg cggcttggag tctacagaaa
     1801 tgccggcact ccacacactg tcttctttag aagggctttc cctgacttac tccaagttcc
     1861 acatctctaa cttccaaaga cttgctcaaa agctcggggc ccacagccac tgctccaacc
     1921 ccaccccacc ccaccccgcc gcgctcgcct tgataaggat ctacaaaaag aggccgcaga
     1981 caaaggcatc ctacgactcc actcactgac gctcagcagc tctctgagtg acctccgcaa
     2041 gcccccacac ccgcctcccc cggaccacgg gggggggggt gacttgagag gaagaaaaaa
     2101 gcaagaagaa agaaaaggcg agctgtagcc ccatgctgtg gctccttgat gaatgtccgc
     2161 caggctccgg aggcctgacg aaggatcaat agcgggtggc ttttctcgcg gggtctgaac
     2221 tcctgtcgtg ggccttagtg aagaggagcc gccaataaat acagtgctgt ggcatggt
//
