LOCUS       XM_039095054             678 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus elongin-C-like (LOC120097475), mRNA.
ACCESSION   XM_039095054
VERSION     XM_039095054.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..678
                     /gene="LOC120097475"
                     /note="elongin-C-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 long SRA reads, 26
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120097475"
                     /db_xref="RGD:41102896"
     CDS             225..635
                     /gene="LOC120097475"
                     /codon_start=1
                     /product="elongin-C-like"
                     /protein_id="XP_038950982.1"
                     /db_xref="GeneID:120097475"
                     /db_xref="RGD:41102896"
                     /translation="MTASRPRQETIYFLWDQIEFYKNIMDGEEKTYGGCEGPDAMYVK
                     LISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT
                     YKVHYTNSSTEIPEFPTAPEIALELLMAVNFLDC"
ORIGIN      
        1 tcaaaaaaat aggcatcaat agatacagga agatagaaat aattctattt gtcctatcag
       61 atcaccgtgg acaaaggctg gtcttcaata aaaacaataa tggcagaatg ccctcagata
      121 cattgaagtt taacaacaca ctactcaatg aaaacttggt caaggaagaa ttaatgatag
      181 aaattaaaga tttcttagca cttccttcgg atgcaagtta ctagatgact gcttctcggc
      241 ctcgccagga aactatttat ttcctctggg atcaaataga attttataag aacataatgg
      301 atggagagga gaaaacctat ggtggctgtg aaggccctga tgccatgtat gtgaaattaa
      361 tatcttctga tggtcatgaa tttattgtaa aaagagaaca tgcattaaca tcaggaacaa
      421 taaaggccat gttgagtggt ccaggtcagt ttgcggagaa tgaaaccaat gaggtcaact
      481 ttagagagat cccttcacat gtgctatcga aagtgtgcat gtattttacc tacaaggtcc
      541 actatactaa cagctccact gaaattcctg aattcccaac tgcacctgaa attgcactgg
      601 aactgctgat ggccgtgaac ttcttagatt gttaaataag ataaattata ataaactgtt
      661 aatttttttc agtattta
//
