LOCUS       XM_039093830            8372 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus developmental pluripotency-associated
            protein 3-like (LOC120096971), mRNA.
ACCESSION   XM_039093830
VERSION     XM_039093830.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093830.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8372
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8372
                     /gene="LOC120096971"
                     /note="developmental pluripotency-associated protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120096971"
                     /db_xref="RGD:41202618"
     CDS             6791..7267
                     /gene="LOC120096971"
                     /codon_start=1
                     /product="developmental pluripotency-associated protein
                     3-like"
                     /protein_id="XP_038949758.1"
                     /db_xref="GeneID:120096971"
                     /db_xref="RGD:41202618"
                     /translation="MDEPSEKVDPVVNPETQMNDGSQRKDEGDSPDDSEILQPETLVK
                     VMKKLTLNPSAKRPKYHRRQRVRLQIKSQPVENRSERIMRGVQSAFPKRRVRTLLSVL
                     KDPIARMRRFVRIEQRQRQLEGNERRVEPFRCLCTFCHYQRWDPSENAKIGQNQKN"
ORIGIN      
        1 tttttgtttt gcttcaaatc tgttgatagt tggacagttt gtacttaggt ttggaattgt
       61 cttctccaag tccctttaaa agccatttga aacagttgtg gcaccgtcac ggaggatccc
      121 gtcgcactgc tcctttacag gaagaagtga tcattttctc tcagctctta catcatttcc
      181 tcatgctcag ggtgcgggca gcagtagaga gggagccaat cagaagtttg ttcttatttg
      241 tctagtgagt aatggcacta ggtgcctcga gtaactggat agtcctatga aatagctgtg
      301 ttttgattat tttcattaat tttattgact cgagcaagtt ttttttcata cattgtgttt
      361 tttgagtctt ctttcaaaac tatgcattgt aaatatcgtt ttccagatta tcctttgact
      421 ttttatcttt tccttttcaa ttccacctcc tttttaaata ttaggtttta tttgctgaat
      481 gtatgttctt tttaaaaaga tttgtttgtt ttattttatg tgtacaaagc tgagtgtttg
      541 tctgtatgtt tgtatgtgtg ccacgcgcat gcctggtgcc cacagaggcc ctaagagggc
      601 atcggatctc ctgagactgg agttagggaa gattgttagc caccatgtgg gtgctgccaa
      661 acgaacgggt cttctgcaag agtaacacat tcttctaact gccaagtcac ctctccagtc
      721 ccaacttccc ccttcttagt tgcaattttt ttaaaaaata aatacaacta aagatatgtt
      781 tatatacaac ttgcttgaaa gtttccttta ttccctttaa gacctattag aatggtttct
      841 ctcaaataac ttctattgct tcatataata ggtctttttt ttttgttgtt cttttttttt
      901 ttggagctgg ggaccgaacc cagggccttg cgcttcctag gcaagcgctc taccactgag
      961 ctaaatcccc aaccctataa taggtctttc ttaaggacat ttcccagacc acacaatggc
     1021 tttccctggc tattaacaag tatgctttgt ggggaggaag gagggagggc attacttgga
     1081 agaactacac ctgaactaac actgaagact gattttcctt catgtctgtc acactttttg
     1141 attaaatcac agtggccagc ttgaggaaca tcaaatctat gatctcctga tcaagggcac
     1201 tcttttatta aagaataaat ccagtgctat gggggtgact atgggttcag ttaaaagaag
     1261 ggaaagctat gtgtaaagtc caggtataga catttgagaa ttcataggaa caaagaccat
     1321 gatcattatg aaactgcttc tgatttaaac ccagtgcaag tgaatttatg gaaatactaa
     1381 gctgttttcc taaccgtcca ctagtttgca tgtcttaaca gaagataatg ctactgaaag
     1441 ttaacatttg catcttacta gagttcagta gtggagacat agagcattag caggaaacgg
     1501 gaatttgcca gaagactaag gatcctccac agacatgaac gtcatgtctc ctcttcgagg
     1561 agagtcatgt cataaacagg aagccaaagc ttctattttc ttcatttgaa ctgtgttgtt
     1621 gaaggaggtg catgacggtg ccaagttcag cagtgggcac tgtggtggat ttgcattgtt
     1681 tctaccacct ggcgatactt ccccgaagtt gcccccttgc acgttaggac tggacaggag
     1741 ataaattgtg caggatagaa ggtgggtgtg ggacagcagc catcttgtat tgtctctgca
     1801 ggttggcctg tggttcaggt acccctgtat gtgcttatca acttatcagc ttctctttta
     1861 ttatctggtt gtttgtttgt ttgtttatct ttcttttcat ccctcagaga tgcagaccac
     1921 tcgaggcctt gtgcatgtta agagaacact agctctcagc tacatgctta gcccaccagc
     1981 tctcttattg cacctccccc acttcccaca agcctcctcc ttgagcttct tttggtctta
     2041 gcccatgtac agacgtacag tggtgcagag tcatggcttc ccaaggtcac cctccaaaca
     2101 gtattgaagg aagttcgtcc tcattacgtc cctgtgggtc acagttcagc caagtgtttg
     2161 tcgtcatcca gctttccttc ccatgtgtta gtccaacatc tctgtaaatt caggcagggg
     2221 aaaacagctt tgcacagagt tcccactcac tctagacatc atgtgactta taactgttct
     2281 aattaatctc taattcttgt tactcattgt ggtcctacat ctttgcttgt acaaagttca
     2341 aacaacgcct agtgggaaga gggcaaggac atgaggtcaa ctgttcatcc caacagccac
     2401 acccagatct atgttgtgaa actttaatga aactgacatt ttattatggg atagtttttt
     2461 tttttacctt taccaatctt tacacacatt ctgtgtgatc tacttatgat tcaagaattc
     2521 aagacaaaat gtattagagg aaagttactc ctgacaactg tttcatttgt cagcatcctc
     2581 tgacccagac cacagagaaa gcagctatgg tgctgctctc ttgctggagt ctgcaggtgt
     2641 gcctctcagg tgggatcctt cagcagaggc tagctcaagt gagctcctgg gcttttgtcc
     2701 agggttttct atcacttcaa acactgtggg ggcctggaga gcacagaaat agttcaccga
     2761 gttttccaga tgtaaaatga cgaggctaaa ggagttagct ggtttctgga ggaagacaga
     2821 acagagactg cccttgcact ctcattgaaa gaactctggc agattaggaa agtgacttct
     2881 cacctggaaa tttgtttgtg ccaagagcag ggtgaggact tctttactgt ctgaatgtgt
     2941 ctgaagggcc ttgaggtgct ttctagatct tgtgggaaca atcagaaaac tgatgatggt
     3001 ttggtgctgt gcataagata ctgtgagaaa cagactgata tagaaatagc agacatacct
     3061 gacagaagac acagtctgct tgcttttctc caatccctgt tgcctcacta ggtctgaaga
     3121 tcatgtgcct gggagcaacg tttcattgtt aatatcacta ccagagtgtg aaccttctat
     3181 tccagagata tacaaacact aacgcacagc aggcaagaga gcagtgtgtg acacatgacc
     3241 ctctgcctaa tcatgtcttt tctgtcttgg ctcagagttc tgaccacaca tgaattacct
     3301 caattcttat gctatacccc aaccaggaaa tggatcaccc tccctaggtt cacaggccac
     3361 agggttgaac acagacagaa aaggcatgac tcaccacaaa ccgttgcttc ttatctctct
     3421 gactttccct ggtaattaag tcaggcagta actgaaaaca gagagctggg aaagccagta
     3481 gctttgaggg ctggagctgg aaacagacag ctacacagct ggtgtgcttc agcgcgattc
     3541 agtggaacaa cttgggagat acatttaaag tataattcat catgaataag ggattctcct
     3601 tgtcatcgag ctgcaggtca ccaacagaac atagaggttt tcattgtaaa aaatcagata
     3661 gctttatgag aagtgaaaac tcataggtct ttgtcttaag aaagtcaatt atatccaaaa
     3721 taaggacagc atcttgcttt ccttcttgac tccggagcct atttaaaatc tgcagctaat
     3781 aaagcaactt ctaaaagtca agctttttat tgtctgtgtt ttgtggactt gtaacaggaa
     3841 ttaaaatatt ttcctttgaa aacccaacat tgaggtttat ttactaggta ttaaaatgat
     3901 ggagacattc gatcatgttg cctttgcacg aagactcgtg cttaggagat tgtgtgccag
     3961 ggttgctctg atactagact ttccaccctt ctgatgcgag gtatttggtt ctaattctaa
     4021 gaggctatat ttttaaattt ggaaaatcat ctcagaatga gcacaccaag catgtctgtg
     4081 atacagtgct agaaattgtc actgtaaaat gtgacacata catacacata ttcatgaatg
     4141 catgtgtaca tcaagaatgt tcctggaata tatacatcaa acatgccctt atgtgtgttg
     4201 aagggtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtagtgcacg cgcactacaa
     4261 acctttagta gatattaaca ccaccaaact tggtgactga atttttgtag tctgctatta
     4321 cagtgttaaa actgtctaga ctcttccatt tgatttaatg attttaatga gggaattacc
     4381 acaaaaaggc caaaagggaa aatgaaaaga acgtacagag aaggtccctg agaggtacct
     4441 gctgtttgat gaggatttaa acaacggagc actgagtgcc acgtgggcga gtttgaatcg
     4501 tttgaagtct gttctttgct tttcagctcc agtattgaca ggaaaccatc attctggttt
     4561 tgtttctgta gccaagcatg tccacggaga cctggggaca tcatcatggc agagtgtcct
     4621 ttcatcagta tggccctgct tggtgttatt gacagagctg tgcaggctcc cttgtcagtg
     4681 gatagtagct gcccctgaaa tgtgatcatt ttgggaggga aaggtcaagt tgaagaatgc
     4741 tacaatatct agattgggcg tctattgcat tttaaacact gctttgccgc tccatgtggt
     4801 gtatttgaca agtggataat atctgataaa agatagagtt tggtctcttc ggaagtactc
     4861 aacaagatcc atatggaaat gtgttaagtt tagcaaatca atctgtgatg agacatgaga
     4921 ccttaagcag aacgctggga attgtgtctg tgatccagtg tatacacgtc acgagtctgg
     4981 gattgccagt attctctcag ctttgactgc tctcctgcct tcaggctgat tgtacagtga
     5041 acaatgctca gtggcccatg gcatccctga ggaggcaaag caggagctca tgttcctccc
     5101 tttcctctcg ttccaagcct tggataggca gcacagcctc tgctcgcact gggattccac
     5161 ggtctctggt actcattcac tctacaccct tcttgctgcc cttctccagt cactctctcc
     5221 cacaatcctt cccccaatcc cccttctcct ctgagcaggt agagccctcc tgggtatctc
     5281 cccacctccc accatggcac ttccactaag gccagacaag gcaggccaga tagtggaact
     5341 catctcatgt acaggcgaca tcttttggga cagcccccat tctagttgtt taggacccac
     5401 atgaagacca agctgcacat ctgctaaata tgtccaggga ggtctaggtg cagcttatga
     5461 atgttctttg ggtggtggtt cagacgttga gagccccaag gacccaaatt agatgactct
     5521 gctggtcttc ctgtggagtt cctatcacct ttgggactgc aatccttttc cctattcttc
     5581 cattaacagt cccaaagctc tatccacact ttggctgtgg gtgtctgtat ctgtctgagt
     5641 caactgctgg gtgaagcttc tcagaggaca gcatgcttct gtttgtatag ttcaggagac
     5701 agtttagtca tggactggag gccatctctc attttatgct aaaaagttac tggctgaagg
     5761 catgtatgtc aaacccccaa atttcaaaag gatatttttg tttcgccatt ctatggagca
     5821 actctaaagt aaatgatgct tagtatctct ctgattcctt tgtaaaaaat atgagaagct
     5881 catattggaa ttaagttcaa attccattat caacccaaac tagaggtttg gtcacagcca
     5941 ccatcatcct tttggggtct gcaggtgtgc atctcatctg gactcctaca gaaggacact
     6001 ttctcttagg cagctcctga tggttttcta gcctacactg taagctaaac tctatgagtc
     6061 agttccaaaa gagtgtcgga gtatttcctg aaccttgcag gcgcagggct gaaatggtga
     6121 ggctgatagt tttagttgct tcctggaaga acactgagga atgactattc tattgtcctg
     6181 gtcataaaaa ctccatcaaa tatggaaact catttctcca ctggcaagag gcttgtacca
     6241 ggattattat atgggtgctg attcatttag tttcagatga acaatccagg gtcacatatc
     6301 cccttcttgc ctggatgtgt ctggtgagac ctgagctact ttctggacca cactgcatcc
     6361 tgtgggaata aagagaaaac acagatgatt ttctgatata aagaataaaa ttctgtaaga
     6421 attaagccaa tttaagtcct aaaacataga aatcaaacag gatctatttc tttgctttct
     6481 ctggttgctt ttcctgcagg gtccctatga agtcttgaat gcccatgtga gactcccctt
     6541 taacatccat gtctcctctg accacatttg agccatccct atcttctcta accatgaaca
     6601 agcaacccaa gtcttctcta acctcacttg agtcacagat gtctaaactc aacattttac
     6661 acttaagttt cttttctaag aaaatacatt cagggcttca gtctctgctg tgtggggcca
     6721 gagtttaggt ctttccaaag attagctagc aattttgttc ggagctagct tttgagttct
     6781 gcccaccgcc atggatgagc catccgagaa agtcgaccca gttgtgaacc cagaaactca
     6841 gatgaatgat ggatctcaga ggaaagatga aggggactca ccagatgatt cagaaatcct
     6901 acaaccagaa acactagtaa aggtcatgaa aaagctaacc ctgaacccca gtgccaagcg
     6961 gccaaaatat catcgtcgtc aaagggttcg tctccagatt aagagccagc ctgtggagaa
     7021 cagaagtgaa agaatcatga ggggagttca aagcgccttt cccaagagaa gggtccgcac
     7081 actgttgtcg gtgctgaaag accccatagc aaggatgaga agatttgttc ggattgagca
     7141 gagacaaaga cagcttgaag gaaatgagag aagagttgag ccattcagat gtctctgtac
     7201 tttctgccat tatcagagat gggatccttc tgagaatgct aaaattgggc agaaccagaa
     7261 gaattagggc agtttgaatc atacactgtc cttgccgtta acggtgccat gcagcagatg
     7321 tgaaagctgt ttttttgttt aagattaaac ttttcttggt gctggggaaa tctctacttg
     7381 ctaaccttta aattatatag gatgtgtgac atttggattc atgggaatga cagatttacc
     7441 caagaattga gcatgagtca aagcccggta gtttgattta gaaggtaatt ggaatagatc
     7501 ttttatttta gattttctag tttgcagaga aatttgtaat agaggcaaat ttgttatctt
     7561 taataaatac acagaacaga ttagaacgag ccattggaga tggggactcg ttttttacag
     7621 atgcatgtgt gggtgtgtgc acactcgtga tgttcagagt tcaatgtgtg ctaccctgtt
     7681 tatttctgct tgaggcaagg tctccatgca tgaggcctag ctcgtctaac tcctggtcct
     7741 gcctcttgtt ttcccctgag ttttgacacc ataggcttgt cagcaagatg tttgtgtttg
     7801 ttcgtgctgt gtaataaaca attggttgac atatcccaca tttttttgct tgcaacagtt
     7861 actttatttt tattgcacaa ataagctgct gtctttacat tccattgaaa cactacagtt
     7921 acaacattta aacaacactg aagtgaactt catggtcatg gtgtctcttc atagcaacag
     7981 agccctgact aagaaagctg cctccaggaa atatgtgctc actaatttat caatttatgg
     8041 gggttactaa tttctctctt gattggattc aaaggctgct acgcaggaca gaattaatgc
     8101 ctggtactgt aatcatgttc agaagccatg gctggggagg tcatgggcac agaggaaaac
     8161 ttattaattt aacattttgc taaatgttct ggttatcaaa tggtcaccta aattttaata
     8221 tttatgacca cagatttttg ctgctcccaa ctcaaatgct ttctcagcat ctaatgaaat
     8281 gatcatgtgg ttttgttctt tcagtttgtt tatataatgg atcacgttga tggttttccg
     8341 tatattaaac catccctgca tgcctgggat ga
//
