LOCUS       XM_039093787            3990 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus REST corepressor 2 (LOC120096943),
            mRNA.
ACCESSION   XM_039093787
VERSION     XM_039093787.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093787.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3990
                     /gene="LOC120096943"
                     /note="REST corepressor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     ESTs, 1 long SRA read, 23 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120096943"
                     /db_xref="RGD:41118851"
     CDS             1826..3397
                     /gene="LOC120096943"
                     /codon_start=1
                     /product="REST corepressor 2"
                     /protein_id="XP_038949715.1"
                     /db_xref="GeneID:120096943"
                     /db_xref="RGD:41118851"
                     /translation="MPSVMEKPSAGSGILSRSRAKTAPNGGQPHSEDDSSEEEHSHDS
                     MIRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDKYIAMAKEKHGY
                     NIEQALGMLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFGFHGKCFQRIQQM
                     LPDKLIPSLVKYYYSWKKTRSRTSVMDRQARRLGGRKDKEDSDELEEGRGAVSEGEPD
                     TGDPKREPLPSRPLNARPGPGKKEIQVSQYRHHPLRTRRRPPKGMYLSPEGLTAVSGS
                     PDLANLTLRGLDSQLISLKRQVQSMKQTNSSLRQALEGGIDPLRPPEANTKFNSRWTT
                     DEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQDG
                     APTAPVPVEEARRGAPVPATALEEDDEVQITSVSTSVPRSVPPAPPPPPPPTSLSQPP
                     PLLRPPLPTAPTLLRQPPPLQQGRFLQPRLAPNQPPPPLIRPALAASRHSARPGPQPP
                     PTLVGAQLEPPAPSL"
ORIGIN      
        1 gtatgtgtgt acggttctaa ctgtctagaa gttcactgag atgtgcgcag ttcaggcctg
       61 ggcaagcgtt cgtgtgagtg cctacctaac ctagatgtat gaaggtttta tttgtgaatt
      121 attatagtac agtggtttta aaaataagaa tagacaaata gctcagtagg acagaataag
      181 aacttagaca ccaattcatt ttcgtgctgt gttccgatct ctgataaata tgctaaacac
      241 gatccaaatg gaaacagaat tatttttaac cagtagagac agagcaattg gatatgcata
      301 tggaatacag tagaacatcc tagatctatc attcatatat ctatatatat gtatgcatct
      361 atgcatgtgt gtgtgtgtgt gtgtgtgtgt gtatgtgtgt tcaaaatggg aaaaagtcaa
      421 aatctaaaag aaaacaaaga cctgtcaagt tatgtcaggc caatattact taagccatag
      481 aaagtaataa ccaagaaaac tcaagtaaat aaattagatt taattaagct taaaacataa
      541 tcaaaaggca agagtaggaa aatacagacc gtgggcttta aaaaaatacc tacaatgcac
      601 acatctaaca aggagctagt gtccagcata tatacaaatc catcatctag ttacttttta
      661 gagacatcct aagttggaag gtgttaaaag gtttgaatag atcgttgaca acatggataa
      721 acatcgaaaa accagtatca ttagtaacca tggagaggca atgaagacat tgttacacat
      781 ctaccagcaa acctaggagt aaaaggttgc caacctagat gggtctaggg caggacggct
      841 gcatgaagcc gctggaactg agacttggac ggaagtaaaa aatcgtacac ccatgttgga
      901 agaaggcata gccatttctg aaagcagctg aacctctacc tgctatacag ctcttgagca
      961 tctgcccaaa aggagtgaaa gcatatatcc acataaagtt gaggatgtcc gtgaaaccgg
     1021 cttgttaaga gaaacccata cgagcggcta tcacacaaac agattgatga aatggtacag
     1081 tggagtgaat ataattaact gtcccagctt gcctggaatt gtcgagaaag tgggcctttc
     1141 aggaaagcca tggccaaccg taaagaccct agcaatggtg agaggcaagc attggtgaca
     1201 cagagactgg tcagctaaac aaaacctgca aacaagtcca cgttctcgga ttctgcttac
     1261 atggagccct acaagaggca gggctgcgtt gaaaaatcag aaatgggaat atttctatgt
     1321 ggggacgact ggcactgtgg ggactctgca tcgatgatga tggcctatgt cttggcagaa
     1381 ctgctaacgt gcacagtggt cgcacccttt ttccatgtgt taatcccgtg ctttgtagga
     1441 taacacgcat ttgttttcta aatcgctgtt attctcccat ttttctatat aattaatttg
     1501 cctataagct gtttttatga attacttctt tgctattgat tctttgccca tttccccctt
     1561 aagaacaacc ttagactatt tataggttta agcagagtta gcccatttta ttcaagcagt
     1621 tattttattt taaaaagtgc tctctccgtt agggctgccc tccggggccc cgacctcacg
     1681 gaccctagcc acgctgacct cctgcctctc atagcctcac tggcgacccc tccaggccgg
     1741 gccgggcgca gcactccagg caagcgcggc aagctcctgc gctctccaaa ggatcccgtg
     1801 ccccccgggg cagcagggaa gggtaatgcc ctctgtaatg gagaagccca gtgcgggctc
     1861 cgggatcttg tcccgaagtc gggccaagac ggcacccaac ggcggacagc cgcactcgga
     1921 ggatgacagc agcgaggagg agcactctca tgacagcatg atccgagttg gaaccaatta
     1981 ccaagcagta attccggagt gcaagcctga gagccctgcg cgctacagca acaaggagct
     2041 gaaggggatg ctggtgtggt cacccaacca ctgtgtatcc gatgccaagc ttgacaagta
     2101 cattgcgatg gccaaggaga agcatggcta caacattgaa caggcacttg gcatgcttct
     2161 gtggcacaaa catgacgtgg agaagtcact ggctgatcta gccaacttca ctcccttccc
     2221 tgatgagtgg acggtagagg acaaagtgct gttcgagcag gcctttgggt tccatggcaa
     2281 gtgcttccag cggatccagc agatgctccc tgacaagctg atccccagcc tggtgaagta
     2341 ttactactct tggaagaaga cccgaagtcg aactagtgtg atggacaggc aggccaggcg
     2401 gctgggtggc cgcaaggaca aagaagacag tgatgagcta gaagagggac gaggagctgt
     2461 gagcgaggga gaaccggata ccggggaccc caagcgagag cctctgccat ccagacctct
     2521 gaacgcacgg cctggtcctg ggaagaaaga gatccaggta tctcagtacc gccaccaccc
     2581 acttcgaact cggagacgtc cgcccaaggg catgtacctg agtcctgaag gcctcactgc
     2641 agtatcggga agcccagacc ttgctaacct cacactccga ggtctcgact cacagctcat
     2701 ctctcttaag cgccaggttc agagcatgaa gcagaccaac agcagcctcc gccaagcact
     2761 ggagggtggc atcgaccctc tccgcccccc tgaggccaat accaagttca actcccgctg
     2821 gaccacagat gagcagcttc tggctgtaca agcgattcgt agatatggca aagactttgg
     2881 ggctattgca gaggtgattg ggaacaagac tctgacccaa gtgaagacct tctttgtgag
     2941 ctaccgtcgc cgcttcaacc tggaagaggt gttgcaggaa tgggaggctg agcaggatgg
     3001 ggcccccaca gctccagtcc ctgtggaaga ggccaggcga ggggctcctg taccagccac
     3061 agccctggaa gaagatgacg aggtccagat tacatctgtc tcaacatcag taccccgatc
     3121 agtaccccct gctccgcccc cacctccacc acccacctcg ctttcccagc ctcctccact
     3181 gctgaggcca cctctgccca cagctcccac actgctccgc cagccacctc ccctgcagca
     3241 gggccgcttc ctgcagcccc ggctggcccc caaccagcct ccaccacctc tcatccgccc
     3301 tgccctggct gcctctcgcc acagtgcccg ccctggtcct cagcccccac ctaccctggt
     3361 tggagcccaa ttggagcccc ctgcaccctc actttgagcc ctgaatcctc cactgcccag
     3421 gggctcctga accccttggc tgggtatctc tggcagcact aaggacagaa gggactaggg
     3481 ctcttgccag gtctttcaaa tacccagagc tgccagctgg cacagcttgg acctgtgggt
     3541 tctgcatgtg ttcctggcag ttgagcttgt aaacccccag ccaggggcta gatctcaggg
     3601 cctgcaggga ctctggcttc ctggctgtga ctggaatggc tgcctccttg cctgcctgcc
     3661 tgcctgcctt tggagggctt ggcctctggg cctacccttt gtgtgtggta gtgactgagc
     3721 ctgggggctg agggagagct ggtgtgttag ctggcctcac ccacctttcc ttccttttag
     3781 caataagtca ggtgcagtgg aaggggactg gggtgggcat ggcagaagcc ttgtgggaag
     3841 aatgttggga agctgtgagg aggcccactc tgtccacccc caaaagcttg gagaaagaag
     3901 ggttggggac ttacacagac atgggtttat ttttcaacat tttttaaaaa gaaataaatg
     3961 caaccttaaa tgtaaaaaaa aaaaaaaaaa
//
