LOCUS       XM_039092885             480 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus peptidyl-prolyl cis-trans isomerase
            FKBP2-like (LOC120096701), mRNA.
ACCESSION   XM_039092885
VERSION     XM_039092885.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092885.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..480
                     /gene="LOC120096701"
                     /note="peptidyl-prolyl cis-trans isomerase FKBP2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins, and 65% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120096701"
                     /db_xref="RGD:41240491"
     CDS             1..414
                     /gene="LOC120096701"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase FKBP2-like"
                     /protein_id="XP_038948813.1"
                     /db_xref="GeneID:120096701"
                     /db_xref="RGD:41240491"
                     /translation="MSVSNQKKTPEPSINPPKNSLAIHSSDEGFVRAPVLTAIGLEEA
                     GGRDMRPTGKLEDGTEFDSSLPQNQPFVFSFGTGQVIKGWDQGLLGMCEGEKQKLMMP
                     SELGYGKRGAPPKIPGGATLVFEVEVLKIERRSEL"
ORIGIN      
        1 atgtctgttt caaatcagaa gaagacccca gagccatcca ttaaccctcc caagaattca
       61 ctggccattc attcatctga cgaaggcttt gtcagggccc cagtcctgac tgccatcggt
      121 cttgaggaag caggaggaag agacatgagg cccacgggaa agctagaaga tgggacggag
      181 tttgacagca gcctaccaca gaaccagccc tttgttttct cctttggcac tggccaggtc
      241 atcaagggct gggaccaggg gctactgggg atgtgtgaag gggaaaagca gaagctaatg
      301 atgccgtctg agctggggta tggaaagcgg ggagcccccc caaagatacc gggtggagca
      361 accctggtgt ttgaggtgga ggtgctcaag attgagagac gttcagaact gtagcaggct
      421 gcagaggggt aggaggcccc tgtcagggac cagactgttt aaaaacaaac aaaaaaacct
//
