LOCUS       XM_039092874            3764 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120096689
            (LOC120096689), transcript variant X1, mRNA.
ACCESSION   XM_039092874
VERSION     XM_039092874.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3764
                     /gene="LOC120096689"
                     /note="uncharacterized LOC120096689; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 1 sample with support for
                     all annotated introns"
                     /db_xref="GeneID:120096689"
                     /db_xref="RGD:41014016"
     CDS             2505..3155
                     /gene="LOC120096689"
                     /codon_start=1
                     /product="uncharacterized protein LOC120096689"
                     /protein_id="XP_038948802.1"
                     /db_xref="GeneID:120096689"
                     /db_xref="RGD:41014016"
                     /translation="MSHKIQEDTRWRQTLAVSSPSNTVSFPARTCLRLDRGQSSDNEK
                     QVLGGPEGRPQPPQASDSSAPGGNSQEKGLYRAALAGLNPAWKKPASSLRHLPASVSW
                     LAAVQRAGDSSQPSPDSWPGPCSSLFSTLFPTESPPTELAGTFSTPGLHPGPLPNNPT
                     DSHSLWGPEKPLWTLVSGNPGCLQYSLRPQHILTKAVAESRTLSHHVYLEFWTWRP"
ORIGIN      
        1 tgtggggctg tattgtaggt tgggtttgtg gtttgtgtgt gtatgtgtgt gtgtatgtat
       61 gtgtgtatat gtacatgtat gtaggtcggg tttgtggtgt gtgtgtggtc tgtgggtgtg
      121 tgtgtgtatg tgtgtgtatg tatgtatgtg tgtgtgtgta ggtcaggttt gtggtgtgtg
      181 tgttatgtct tggaaatcca ttttgaagga gacagacttc tttgtgggga gggaaggagt
      241 ttgagaaggc cacagtgggt gccccctgag ctctgcaaca ctcacaccac tcctttccca
      301 caccttcatg cacctcacac cctgcaaggc tccatagaca tgcattcccc tgcagtggtt
      361 cttacctgag gaggatatgt tccgagacag tgaaatagca agcagtgccc ttatgtgaat
      421 acattttcct ttatagacat tgtagacatt aggtagaata gccaatcaat aacagctcat
      481 aataaaatag gacaactcta acaatatgtt gcaataatgg ttatttaaag tatgagaatt
      541 gattatttct gaaaattttc actcagtact tttatgtcca ggatggcaat atcagtagac
      601 atgctaacac ggaaggggga aatctcacac tagactcttg aacgaagaac tccaggcaac
      661 cgaagatgag agagagagag aggagagaga gacagcttct cccaggaaag agccccctag
      721 ttgtttgaac aatacaaagt agtcagccct gaaaccatac acacagaaca gcagcaacag
      781 caacaaaaca gacttggaag ggtgcatttc tatgtctgtg cacttataag caaatataca
      841 tatgtgtaac aataactagc gtgtgtcact ttgaaagtgg aaggagcagg aaggaagaca
      901 ggaaagaggt taaagtatta aaaaaaaaat aacactagtc tcaaatccta gttgaccatg
      961 ggtaacctaa aaccaaagaa agcaaaagta aggatgggaa gagagcgact gatgttagca
     1021 gcaggtaaag gagggcttca tggtgcagct gagaggcatt aagtagtctg tcacaagtca
     1081 cagaattgga gaggaacaga tggactgagg tccaggtcct gcccctacac aacatctcca
     1141 gaccactccc tgtggctcct gtcagggttg ggtcttgctg ctgcgtggta ccccatgaaa
     1201 accttatttc agactctgaa tgcttaagta aggttccaga gcagccttcc agaaccttcc
     1261 tctggaggtg tgtctgtttg acagagcatg gtggaggggg tcgggaggga agggaacaga
     1321 aggcaggagt gggcaggtta ttttcctagt ttcccattgc atagagccaa agagcaggag
     1381 acaaagacaa actcacgctc ctgacgctgc ggattcgctc tgtgctctgg atagcccact
     1441 ggagtggttt gcgagcacgg agaagggcag cctcaggaag tgtccgtgtt gagggctggt
     1501 gcaggacatt tgagtacagc agaggcttac agcaagaccc cttatttggg ggtcacagtg
     1561 aatggcccag ggcaggaagt aaaagatatt tgtctcttca aaaacctgca gggactggag
     1621 aggtggttca gcagttaaga gcccttgctg ctctaacaga ggagttccca gcacccacat
     1681 ggtgggtcac aaaggtctgc aactccaatc ccatcacatc cttccggaag atccaacacc
     1741 cctttctgac tggaggcact agtcatgcac ctgtgcacat acgtctgtgc aggcaaacac
     1801 tcagagaata aaagtaaatg actcttagag caggcatggg tcagggatcc ccttggaaag
     1861 gtgcgcttgc aggtgcgtgc gtgcgtgcgt gcgtgcgtgc gtgcgtgcgt gcgtgttgcg
     1921 aagtgggcag tcccatgcct cctctctcca ccagcaccgt tttttcttgt gtgtggaacg
     1981 ggataggggg tactaatagc ccttctagtt gtttctctga atgataataa tttaatgaga
     2041 gcaatagcaa atagtggctg taactagtag aaagttaaag ttagagggta gtcaggtgct
     2101 gagccagcac aaaagcgagg ctgacaacca agatttggct ggttccgaaa cagcagattg
     2161 aaggaatctg taaagagccc ttgtactggt tctgagagct ctaaaaactg ggttgaaaat
     2221 gaagagtaca ggagccataa aatagcgcca agtatttttt ttcccctagt gtgagccaat
     2281 cttttgagac ttggactcta aatattacat atgagtcact cctacttcct tcccctccaa
     2341 aacaatcttg tctgggacac attaggaggg tggcttttca gcgtctccca ccaaactctt
     2401 gtctctcatc gtgggcagaa cagccccttg cagaaaaact gtctccttca tttcagtccc
     2461 cttggaggct agagccagtt tccatagaaa aaaaggagcg tcctatgagc cacaagatcc
     2521 aggaagacac taggtggcgc cagaccctcg cggtttccag cccgtcaaac accgtttctt
     2581 ttcctgcgag aacctgcctg aggctggacc ggggtcagag ctctgataat gagaagcaag
     2641 tactgggagg acctgaggga agaccacagc caccccaggc gtctgacagc agtgctccag
     2701 gaggcaactc ccaggaaaaa ggactttacc gcgcagccct ggctggcctg aatcctgcat
     2761 ggaagaagcc agcttcgagc ttgcggcacc tccctgcctc tgtctcctgg ctcgcggctg
     2821 tacagcgtgc cggagacagc tcgcagccct cacccgactc ttggccaggt ccctgctcat
     2881 ccctcttctc tacgttgttt cccactgagt caccacccac agagctggct ggcacgtttt
     2941 caactcctgg actccaccca gggcccctcc caaacaaccc tacggattcc cactctctgt
     3001 ggggccctga aaagccactg tggaccctag tgtctgggaa ccctggttgc ttgcaatatt
     3061 ccctgaggcc acagcatatc ctaaccaaag cagtggcgga gagcagaacc ctcagccacc
     3121 atgtctattt ggaattttgg acatggagac catgacatgt gggtcctcct gacagagagg
     3181 gttttattgc taacccaggc tacagtgaac gcactttcat gctctgttca agcagaatta
     3241 attttcctca gagaagtgga aattactggg gagcctatga gagaaaacag aagaaaaagg
     3301 accctctgtg aggcaggtag gctacaggca acacctgtgt tctggagaca gagagttctg
     3361 gaaataaaca tgtggcttaa caggcattaa acgtgaaaat gctcatttcc agagctaata
     3421 tacaacaact gcttccaagg aagactttgt ctaacttaat gaactgatgt tcacgcacag
     3481 tagccacttg tattccccaa ggggtcactt cctcctgttg gtggaatagc tatactggct
     3541 aattcagtgt cacacacagc aggggagatg ggttcctcct cctttgtaaa tccgtcctgg
     3601 gcattggcta cactctttct aaaaccctgt gattttgagg tcacattgac aaaatattcc
     3661 tttgtattct tgctgctgtc tgcaacccgc tttcatctca cggattaaag agagctcagg
     3721 tttctgtgtt ttaataaatg tgacctagat aatggtaaac agcc
//
