LOCUS       XM_039092819            3303 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus developmental pluripotency-associated
            protein 3-like (LOC120096627), mRNA.
ACCESSION   XM_039092819
VERSION     XM_039092819.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3303
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3303
                     /gene="LOC120096627"
                     /note="developmental pluripotency-associated protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120096627"
                     /db_xref="RGD:41174488"
     CDS             2221..2697
                     /gene="LOC120096627"
                     /codon_start=1
                     /product="developmental pluripotency-associated protein
                     3-like"
                     /protein_id="XP_038948747.1"
                     /db_xref="GeneID:120096627"
                     /db_xref="RGD:41174488"
                     /translation="MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVK
                     VMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVL
                     KDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN"
ORIGIN      
        1 ctccatcagt tgtcttatga ctctagctaa gacttctacc atattggata ggtatggagt
       61 ggacaacctt gtcttgttcc tgattttagt agaaatactt aggatttccc tccatttaaa
      121 ttgatgttgg ctataggctt gctgtaaccc accaccttta ttatgttgag atatgccccc
      181 ttgtatctga aatctctcca gaagtttgat ctcgaaggag tattggactt tgtcaaagat
      241 cttttctgca tctattgaga tgataatctc tagaacaaaa gaaattatac tcaaaaggag
      301 tagatggcaa ataatctcat tccaggcaga aagaaacaag aaatacaaaa aaaaatcaat
      361 gttaaaaagt tgactatttt agaaaatcaa caagactggc agacattagc caaattaatt
      421 acaaggcaga gaaagaaaat ccaaattaat aaacttagag ggaatataac aacagacact
      481 gaggaaatcc agagaatcag gatatactta aaaacctata ttccaacaaa ttggaaaatc
      541 taaaagaaat gggtaatttt ctccatacat tacaatttac caaagttaaa tcaagatcag
      601 atacacaatt taaacagacc tgtaatctct agtaaaatag aagcagtaac taaaagtgtt
      661 ccaactacac aaagcccagt gccagatggt tttgtgcaga attctaacag acttccaaag
      721 aagtattagt accagtactc ttcaaattat tgcacaaaat agaaagagaa gggacattgt
      781 ctagtttgtt ttgcaaagca caattactct gattcccaac ccatataaag acccatcaaa
      841 gagaattcag accaatttcc tttatgaaca tagatgctaa aattctcaat aaaatatgtg
      901 caaaatgagt ctcagaacac attcaaaaaa tgtcctccat gatcaagtag tcttcctccc
      961 aaagatacaa gtatggtaca acatacttaa atcattaaat ataatcaacc aaataagcag
     1021 actgaaagac actgtttgtt ctaattagta atgttagtgt catccaaatt attcatttgt
     1081 taagaattat atgactattg aatagtaaaa ttaatctact cctgtttttc tatttgtgat
     1141 ccttgaaagt cacctctgtg aacgtgtcat atctgagtta taatatcatg tgaattgttt
     1201 cattatgctt cagtaacaaa tattttccca atctccaagt cctaaacttc caaagactat
     1261 tttttaatca cactaagttc tctactgagt cagcaaatca tgctctgctc atgttaccag
     1321 aaacgaagtt aatggggcac ttgtgtagcc atgagattct gagcagttct cagtgatata
     1381 tctacgtatc tgcaccagag aaagcataga ccatttccta tggtttgtgc aagaattgtc
     1441 acaaaatcac atggagctat aagtagataa taaagaataa ttactagaag aggacaaagt
     1501 agaaaatata tgaattctct tgtataggtg tgatgacaaa atgggcatga acatgatgac
     1561 accaacctca tttaaatatg gtgagatcct ggaagtgtgt ggagcacagt ggctcgttct
     1621 ttgctcagtc tccagatcag tgcctacaag acattttaat gaatgctgtt gatagattgc
     1681 ttaatgttca gatgacagtc ttttccctca aagaactgat aggaaaggaa tgtaaacaca
     1741 cacaatttta gcctatccct actcccatga ctatgtttag cagtatttat gaatgttcct
     1801 aagttttgaa aaacagacaa cccttagtaa acaatatcct aagggaagat gaagagtcag
     1861 gcgatatata ttgtgaaaat atacatggca gattcctaac taatcctgtt gagtcctgat
     1921 gctatgaaga acataacgtg tggtagagaa taagcctcta gggaagagaa agttgacaat
     1981 gaatttgcta aggtagtcaa ggaagcctgt ctgatgagta acttcctggt aagaagagat
     2041 tactattgga aaagttgaga agtcaagcag aaaatacaga taaaaacaga aatgcagttc
     2101 tctatttaaa actccattgt gggcttcagt ctctgctgtg tggggccaga gtttaggtct
     2161 ttccaaagat tagctagcaa ctttgttcgg agctagcttt tgaggcttct gcccaccgcc
     2221 atggacaagt catccgagaa agtcgaccca gttgtgaacc cagaaactca gatgaatgat
     2281 ggatctcaga gggaagatga agaggactca ccagatgatt cagaaatcct acaaccagaa
     2341 acactagtaa aggtcatgaa aaagctaacc ctgaacccca gtgccaagcc accaaaatat
     2401 catcgtcatc aaagggttcg tctccggatt aagagccagc ctgtggggaa cagaagtgaa
     2461 agaatcatga gggaagttca aagcgccttt cccaagacaa gggtccgcac actgctgtcg
     2521 gtgctgaaag accccatagc aaggatgaga agatttgttc ggattgagca gagacaaaga
     2581 cagcttgaag gaaatgagag acgagatgag ccattcagat gtctctgcac tttctgccat
     2641 tatcagagat gggatccttc tgagaatgct aaaatagggc agaaccagaa gaattagggc
     2701 agtttgaact gtacactgtc cttgctgtta acggtgtcat gcagcagatg tgaaagctgt
     2761 tttttttttt ttttgtttgt taagattaaa cttttcttgg tgctggggaa atctcttcta
     2821 cttgctaacc tttaaattat ataggatgtg tgacatttgg attcatggga atgacagatt
     2881 tacctaagaa ttgagcatga gtcaaagccc ggtagtttga tttagaaggt aattggaata
     2941 gatcttttat tttagatttt ctagtttgca gagaaatttg taataaaggc aaatttgtta
     3001 tctttaataa atacacagaa cagattagaa cgagccattg gagataggag actcgttttt
     3061 tacaggtgca tgtgtgggtg tgtgcacact catgatgttc agagttcaat gtgtgctacc
     3121 ctgtttattt ctgcttgagg caaggtctcc atgaggccta gctggtctaa ctcctggtcc
     3181 tgcctcttgt tttcccctga gttttgacac cataggcttg tcggcaagat ctggaaaagg
     3241 cttgatgttc gtgtttgttc gtgctgtgta ataaacaatt ggttgacata ttcaaaaaaa
     3301 aaa
//
