LOCUS       XM_039092780            4834 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120096621
            (LOC120096621), transcript variant X2, mRNA.
ACCESSION   XM_039092780
VERSION     XM_039092780.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4834
                     /gene="LOC120096621"
                     /note="uncharacterized LOC120096621; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 3 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120096621"
                     /db_xref="RGD:41184450"
     CDS             2985..3722
                     /gene="LOC120096621"
                     /codon_start=1
                     /product="uncharacterized protein LOC120096621 isoform X1"
                     /protein_id="XP_038948708.1"
                     /db_xref="GeneID:120096621"
                     /db_xref="RGD:41184450"
                     /translation="MGLPFSLCKSVIVVGLWFAGLQTVRTGLSPTLLPALGTLSSYQF
                     TDKEVKTQRGQLFPKDRVTYKKEKHPGFPSTQQCPPGLPKRGGNRRQAGSNVPNGWGR
                     HSTLAFLHVCWSDYDLWPMMKSFIFKMVNEREPRQRKWVLTSQTRLNTMLRILYSQLS
                     PGQHKWLKQAGFLQQKTSGLHQARGNSAADETLQSYWSHQTGRPSWNDCSNNGASLCI
                     ASHTFQGQPSLAHDHCHAYLSKTKKKL"
ORIGIN      
        1 aatggcatct gaaatgtaaa taaaaaaaaa tccaaaaaaa aaaaaaaaaa agaagtcagt
       61 cctcttcctt aatggagaag tacatcattg gttgtgatac acatggatcc aactaggctt
      121 agttagccaa agaacttctg ttgtgtgaca tcattctctc gcacaaagtt gatatcatat
      181 catcataact ctgctttttc ttttccaaac ttagtgtcca gagaaaaacc cttcagggaa
      241 tattatgata ggcaaaaact tcagtgctat ttgtgcaatc tgggctgatt aaaggcaatg
      301 ggtataggtg taattatttt gactcataat gggttggaga tctttcctta gatctattat
      361 tgggtccagt gtatgaagta catgtacttc tcattttaca gcatctgctg gagagaatgt
      421 atggtacagg cacacaggac ctatggtcac tgacgagctg catgaccttg acaagtcatt
      481 tcatttttca tactcaagat cactgtccta gttatctttg catgacaact ggacacagcc
      541 ttgagtcatc tgagtccacc aactagatca gattagtctg tggacaagtc taaagaggac
      601 ttcctgggtt gttaattaaa gtaggagagc ccagactctt cttcctccta aggatgatgt
      661 atggcatcat tcctcaagga aataatcttg gcctgcataa gagatttagc taagtatgag
      721 ccttgttatc agcattcctt cacggtttct acatcaagtt actgccctga cttcactcaa
      781 tgatggactg taatctgtaa gctgaaataa ggcctttctt cccctaagct gttttggcca
      841 gagttttttt tatcatagca acagaaagcc aacatagaca ttagacatag aaagtactac
      901 atagacatta gacagtgtga atatttgtac atataatcat atatacatgc atatgatcta
      961 taaacataca tataatatat gtgtttatta gttacctcag attcacaatg tccacaatgt
     1021 tactgctcct gttgctagga cagtgcctga tacatagcaa gtgttaggca agcctgctag
     1081 ctcactagtt attagtagag ccaaactggg aggagtggtt tcccaaggga aggagcttgg
     1141 gttgtcacct caactgtcta tgtcatttca ttgcaagatt tgtggtgtgg ccaaatgtct
     1201 ttgtctttta gctcagctcc ctgctaatgg aacctactga cactgctcat atttgaattc
     1261 agaaggatcc aataggcatc tgagccatgg atctagggca ttgccaatct ttctggccaa
     1321 agccaggctt ggtatgttag gggtgaactt gtgtaggaaa ccaagtaact ttttcatctt
     1381 tcatgtcaat gtaactttgg actcaggaat gcaacccagg ctacacacag tgtgcagttc
     1441 ttcaggatga caaattgaaa cagtgtcaaa gctctctttc ttcttgtccc tggatgaaag
     1501 ataaagatta accacaccat aagcaaacag cctgatttcc ttacttgtgc ttgattagaa
     1561 actgaattta ggattaccca taatccaact gtagactcaa ggcagtttta gtccttgtca
     1621 gcaacactga caaggttaat caatatgcac acagtgtgat actctgattg atagggacat
     1681 ctagtggact ccagttctat tgtcccaaag aatgagaggt cttgtgagtg agtccctagg
     1741 tctcttgaaa aatacatgca acagtgacac cttggcttat aaaatctttc gtggtccctg
     1801 ttgctgtcag gatacaattt gaagtccctt ttgaggacct gtaagaattc ttttttgtat
     1861 tatggtgcct cactacacag tactatctaa attaactgaa atttaaagtt taactaaatt
     1921 ggaaagttga gtttctcaag tgcactgacc tcagttctag ctatgaaata acctcattgc
     1981 ttctgggagc atggagaaca catcattgtc ataggccaat tggttagtcc aaccctgcct
     2041 gctcatgtgt ttatcagagt acagacactg cctctgggat catctttccc attttcccca
     2101 gtgcatagct ctttctcacc gtcattcaca tttccctctt tgcctctcca agtccttacg
     2161 ttgcaggtta agctactttc tctgatcatt acctccaatc aaaattcttt gtctcaacta
     2221 gttcctcttc tatcagactc atctattttc tcatttaagg attttcatgg atacagccat
     2281 gacccttgac tctaagtggt aagctcacaa atgcagtcag actttaaata accccaatgt
     2341 tcaacatatc cgaggttttc catcaatagc tgttgaataa atgaatgttt gattggacaa
     2401 gtccttctat gtgatacctc ccaatgatac atttttgaag tgttcagaca gaagggacaa
     2461 agactgattt tctcattcca tcccccattg tcctctgaaa tgacaacttt gaaattctgg
     2521 tttctttaaa gaaaaaaatc ccataaaaac attataagaa agtgtttttg ttttaatcct
     2581 aggtttaggg atatgtgctg cttcatattg tccatagcag ctgaatatga tttgcctcat
     2641 gctctagaag aggcgtagtt ttgccagctg cagatagtgt ctgtgactgt gtggcattcg
     2701 gaattctgga aactctgcag agggtgtata aatgctagga ctccgccccc ctccaagaac
     2761 ggtgcattgc tcagccatca ttagagaagc ttcctccggc agctgatgga gcagattcag
     2821 agacacacac ccaaacatta agtggatgtt gggaaaccca gtgaagaaga aagggaagat
     2881 tgtaggagcc agaggggtca aggataccag gagaacatca tctacagaat caactaatga
     2941 aggctcctag gggcagacac tgaagtggca accacagaat ctgcatggga ctgccctttt
     3001 ccctctgcaa atctgttata gttgtggggc tttggtttgc tggacttcaa acagtgcgaa
     3061 cagggctctc tccgactctt ttgcctgctc tcgggaccct ttcctcctac cagttcacag
     3121 ataaagaagt taaaacccag agagggcaat tgttccccaa agatagagtg acttacaaga
     3181 aggagaagca tcctggtttc cccagtactc agcagtgtcc acctggtctt ccaaagagag
     3241 gtggaaacag gaggcaggca ggaagcaatg tgccaaatgg atggggccgt cattccaccc
     3301 tggcttttct gcatgtttgc tggagtgatt acgatttatg gccaatgatg aagagcttca
     3361 tttttaagat ggtaaatgag agagagccac gacaaaggaa atgggttctg acctcgcaga
     3421 caaggctaaa caccatgctc cgtatacttt attcccagct gagcccagga caacacaaat
     3481 ggctgaagca agcaggattt ttgcagcaaa agacctctgg actccatcag gcaagaggga
     3541 attctgcagc tgatgaaacg ttgcaatctt attggagtca ccagactgga agacccagct
     3601 ggaatgattg tagcaacaat ggagcatcct tgtgcatcgc ttcccacaca tttcagggtc
     3661 agcccagcct ggcacatgac cattgtcatg catatttaag taaaaccaag aagaaattgt
     3721 aaggctctgt gtcagcctct ttgctgccgc tgtatatcag aggacctcct ctggatcaca
     3781 tgtagttctg ggaaacttca agtcaggagc taaatcaaca aagaggccag agctgggcag
     3841 atatcagcaa cagacgcctc agtagagtgg caggcacatt catggttcct tcacccatca
     3901 gaagcatggc cctggcatct gtgtcaaaaa gtggcagaaa tgctgtcacc cagagcagtc
     3961 cttcattata acttgaggat tattcctgat ttgtagctgt caagtgctat tcttggcttg
     4021 ccaaaaaatt tctagagctc ttctaattaa accacttaaa ataaaggcta caactgcttc
     4081 agcattgcac tcgtccttct gatttcaaga tggtagctgg aaaacccttg aaataaatgt
     4141 attccttact atcaaaacga tgaatgaaag aaaagttaaa ataaaaatac aatagcactt
     4201 ggaaatgaga ccaaacactt cctggactgg agtttgcgac ccattcttag aagaaagtcg
     4261 agtagtagaa gtgcgttcct gttttcaggt tactttgctc aaagctaatt agagcttccc
     4321 ttcgttttct agtgactagg tgtagaaatc gtgtgctgcg gctttccagt accaacactg
     4381 tcatgtgact aatgccgccc ctctagatct cacccacgtg gacatacgct tcctgtcgtg
     4441 gctctgccta ggcatgttcc tttgggtctg tgaggttctg tcaactgcta gtgctaacgc
     4501 cattctgtgt aaccaaactc actggcaaga atatagtgtt gggcctttca accactagaa
     4561 caaacttttt ttcttttttt ccttttccat ctttattaaa ttgggtattt cttatttaca
     4621 tttcaaatat tattcccttt cctggtttcc aggacaacat cccctaaacc ctccccctcc
     4681 tcttctatat gggtgttccc ctccccatca aacaaacttt ttttcaattg acagttgcag
     4741 aattgtggag tgtttttaca ttgatctttg gctaatgcag ttagcagttt gttttgcatg
     4801 tatgacttaa taaattcttg aatcataaaa aaaa
//
