LOCUS       XM_039092579            4771 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus rabphilin-3A-like (LOC120096524),
            mRNA.
ACCESSION   XM_039092579
VERSION     XM_039092579.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4771
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4771
                     /gene="LOC120096524"
                     /note="rabphilin-3A-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:120096524"
                     /db_xref="RGD:41010080"
     CDS             1..444
                     /gene="LOC120096524"
                     /codon_start=1
                     /product="rabphilin-3A-like"
                     /protein_id="XP_038948507.1"
                     /db_xref="GeneID:120096524"
                     /db_xref="RGD:41010080"
                     /translation="MFSGPRSSRPQEPVEDPNGRRLGRARRPRAAPGALRGRGTGRGG
                     GGGARGAAAAQHRPRLAAAQRRYTQSLDKAPGDPPLGTHQTDSTQGVRGQASSLRSPL
                     RPEGRLPAPTASEVQGSSGVMRPGPRPSSALPPARPQAAPASSPL"
ORIGIN      
        1 atgttttccg gcccgaggtc ctcgcgcccg caggaacctg ttgaagaccc gaacggcagg
       61 aggctaggga gggcgcggcg tcccagggcg gctcccggag ccctgcgcgg gcgcggaact
      121 gggcgaggcg ggggcggcgg ggcgcgcggg gctgcagcag cgcagcaccg accacgcctg
      181 gccgcagccc aacgccgcta cacgcagagc ctggacaagg ccccgggaga ccccccactg
      241 ggcacccacc aaactgacag cacccagggc gtccgggggc aagcgtcctc actgcggagc
      301 ccgctgcgcc ccgagggccg gctccccgcc cccacggcct ccgaggtgca gggcagcagc
      361 ggcgtcatgc gccccggccc gcgcccctcc tccgccctcc cgcccgcccg cccgcaggca
      421 gccccggctt cttctcccct gtgacgttcg cctttagaat gcaatggaaa aggagttgta
      481 ccaggaggtt tgggtgagtc gtttgcttgg ttggagctca gtgatgatgt ccagcttgaa
      541 gacggatgac ggtgacctct gtgagagaag ctttaggcgt tggagccagt catgtgtatt
      601 tcttcagacg gttaatgtat tccttcatag tgaatgcttt ttcacctttc ccctggaggg
      661 tagctggcaa cagcctacaa gtggtttatc caactcctgc ctcatggcca atcacagact
      721 caactttaac cagaggccag gtgctctgcc ctgaactttt gggagtgagg tctccgggtt
      781 actgtaaagg atccttgaga taacatgaag actagagttc tcccacctcc attttctgac
      841 actagatatt ttcttgaatt tatgttaatt gccccaccac caccacaaag cagcccactg
      901 gcttcccagt cagctcccag gctatccaga aatcctgtaa tggctctaat gggaggaaaa
      961 ggatgatgaa tcatcattac taggaataga aatgctcttt ggagaacagg gtctggagaa
     1021 actgacttcc tccccgttct gcaagatcct caactgtggg cttttcaagg gaagatggtc
     1081 cgtggcttaa aaggcagtgt tcacctgctt ataaagcaag ctgggctggt ggattcatag
     1141 tttagtatta aaatgaaaca aaattcactt gtcacagcac actgaagatt acttgttgta
     1201 gagttttact atcagtttgc ttttgattat atggagagga ttgataacac agccagaagg
     1261 tcaattcctt caagggtagg attctttgtt ctttcgaatt atttgttcag ctaagaggta
     1321 ctaaaagtag ttttttgaac tgagtcaaac aaaatccaca tgggagctgc tacccttact
     1381 gggtaataaa ggaaacccac tagaatgaaa gttgcttcac ttttgcgggt ctatgggggt
     1441 ctctggtatc atcccaccca cgctgttaat agatcaccag tctaaaccac atcaatagtg
     1501 ggagacgcct ccctttaaat tcttccaaag ctattgtgaa atggtaacac ctaaatgctt
     1561 ccctcatcac agatagcagg tacttaaatc tttctttgat gggtgactca tctcccccat
     1621 tccactacca cttcagtctt attttttttc ttcaaaaagg aacccccccc cccagccagt
     1681 aattagttca aaaaagatgt gaaggcaagg attcaagagc tttaccacaa acacctcacc
     1741 acttctctat ctttcggtgg gaagtaaaaa tcacccagaa gaggccagtt ctaaacctag
     1801 agatactatt tgagaagaca tctctttaaa aggcaaatat ttggaacaaa aatttaaact
     1861 ttagttagtg acagtggcaa ctcagaatta tcttcaaata tatcagaagc agttttgtag
     1921 aagtttattt ttagaatcaa ggtcaattta aaggaacgta gaatttatca ttatcatgtt
     1981 tgtaacatac tacttttcac taacaaaaac caaaaaccta taattatatt tggctttgtc
     2041 ttccagagaa acattgtagg gtttgttttt gcttttcgag acaggatttc accttattgc
     2101 aaggctcgtc ttaaactcac agcaatgtac ccatatcaac ctcaagtgtt gggcttacaa
     2161 ggcccaacac gatgcccatt agaaatattt tgttatgaaa atgttgtgag gggttggtaa
     2221 tttagctcag tactgaagtt tgatatttag caggtgtggg agacattcaa aatcacagaa
     2281 gttttccaga tataaattgt cactttaact tttccattta aaatatggag ggaaatgttg
     2341 ctaacatgta tcagtaactg tagtctgtgt tatgatgcta taatacaaaa ttcccaaatc
     2401 ttagcatagc atacaggtcc ctaacccaac aaaggttaat gtattgcttt gtaaagtcag
     2461 ctctggatta aagaggcttt ctggagaagc gtcttccatg taccagctca gcattccagg
     2521 atacgttaat gttagggtac ctccatgtca atgagtggtt ccactccctg gtgagggaag
     2581 cctgtgatgg agggttaggt accagcaact aacaaatgac ccttggtctc ttcccacttc
     2641 aacccaaagt aagtcatgtg actacacctg ccgccggagc tgtgtaaaca agttgtctac
     2701 tacctcctat ttggtttgga aaagaaagaa ttgataccct cgtcttccct ttgttgtcct
     2761 atattagccc aagtagaacc tgtcgtttat tatactgacc atagccttaa actttaaaat
     2821 caaaacatgt ttttctaaac ccgagtgaat ttccataatc tttatttatt cttcaacatg
     2881 cacccttttg acccctatca agagtgggga gctttctcac catcagaatg tttccgccaa
     2941 gtgtggtagt gtgagcatgt gttccagcac atgggacttg aggcaggggc attaggaata
     3001 caaggatatt ctttgctact tagcaagttt gagaccagcc tgagctacat gagaccatgt
     3061 ctcaaaaatt ttttaatttt atattgaaaa gaaaaaactg ttaaaacata tattgaaaca
     3121 gctctcatga atgaatactt tttggcacta aatcacaatc actgacataa agtaatttac
     3181 tctgattaat ttgataaata tattcctaga agaatatgat gtattctcta aaacagaatg
     3241 gtgggtagtt tgtttgtttg tttgtttgtt tgtttgtttg aatcaccctt tcctgaattt
     3301 tccattttgg tgggtaaata actttattat atgatatggt aatataaaca taaataatgt
     3361 ttagaactcc tttttcttat tctttttttt ctcccctccc cccttttttt ctgtttttgg
     3421 agacaggggt ttctctgtgt agccttggtt atcctggaac ttgttctata gaccagaact
     3481 gctctgaact catagagatc atcctgcctc tgccttcaga gtgccactac atctggcaaa
     3541 aaccttagaa ctctttaaag tagcaaatcc caactcaaaa tgggctaagg acttgaacat
     3601 atcatttacc agtgacacat acgtgttcaa caagctcctg agaatatact caactttatc
     3661 agctattagg gaaacgacaa ttaaaaccaa gagaaaccac ctcatatgca ttaaggtacc
     3721 tacaattaaa acaaacgaaa agaaaataac aaacattggt gagaatgtga gaaattgctg
     3781 gtagaaataa aaacaataat gcagcccctg tggggaggaa aaaaaaatct agcaggctcc
     3841 caaaagtcaa atgtgcactt atgtgacagc aatccccaaa gaattaaaag caggtattta
     3901 aggaatacct taaagtatta aggaataaca cttatgagta agtgtgattt ttcatgatgc
     3961 ccaaaagtta gagacatccc aaaagcccat caggcaatga gtaaagaaaa cgagctgtgc
     4021 atacagtgga tgtgtgccgg gatgcaaatc attccaggga aggttaagtg agagaaccca
     4081 gacaacatgt tcacattatg ttacttgatt tacatgacat attccaccta ggtaagaccc
     4141 tggagatggg aagcaggttg gtagctgtag gaagtagaag aggcagggaa aatacggaga
     4201 aaactgcaga atgcatgtgg tcttagagtt actttggagt tatgaaaata tttttgacct
     4261 aaataaagat gatggcttca tcgcctacct gtatgaaata ctgctgaatg ctcactttcc
     4321 caggagtggt gctcgtaaaa ccagtactca gaggcagagc agagtgtcaa gggtgtagct
     4381 catggccagc atgagctaca cagcgatatc ccaagcctgt aggcaaatag acagaaatta
     4441 aaaataaagt aggatggtga tttttgtttt atgcgtgtca tttaaaattt taaattcatt
     4501 tcaaaagtaa cccatttaaa attaaatcag ttacatttta aaataaaatt aaaaatcatt
     4561 taaaagtaaa gtcatttaaa attccttatt ttggatcatt gtccagtaat tccctagctg
     4621 ctagactttt tcagactttt cagatttgcc tgaatatttc tcttgagaaa ggacttttca
     4681 gtatatctcc tagagtcatg ctgaccaatt ccacatgtat gttttcagaa agtttgattc
     4741 taattattga aataaagaaa tataatggtg a
//
