LOCUS       XM_039092556            1489 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PRAME family member 8-like
            (LOC120096511), transcript variant X1, mRNA.
ACCESSION   XM_039092556
VERSION     XM_039092556.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092556.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1489
                     /gene="LOC120096511"
                     /note="PRAME family member 8-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins, and 35% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120096511"
                     /db_xref="RGD:41328344"
     CDS             1..1440
                     /gene="LOC120096511"
                     /codon_start=1
                     /product="PRAME family member 8-like isoform X1"
                     /protein_id="XP_038948484.1"
                     /db_xref="GeneID:120096511"
                     /db_xref="RGD:41328344"
                     /translation="MSVQTPPTLQKLARQALVRNEAVAVSCVGELPTVLFPALFKEAF
                     EGRHINLVKEMVADWPFPSLPVGALMKTPNLETLQAVLDGVDMRLTRKFHPRRTKLQV
                     LDLRNVHHSFWNIWTGEEDSSCSAENLEEKPVVKVFPKYALRDQCVKVIVELCIWSCL
                     DEAQAYFLKWAQQRKASLHFCCTKMKIWRLPVHAIREIMNVFDPQHITELELHAEQTL
                     LDLEDFAAYFGQMRNLRKLFLEALQGMISSNRNETRDREANYMKNFISQFCKFNCLQH
                     LCVHFLRDHMNQVLGCLMTPLETLSVTCYIISQNELNSFSCCKSLFQLKHLELRGVIL
                     HDVDIMSLRGFLEKVADTLETLDLQCCRMKDSQLYALLPALRNFSQLTTVKFYSNKFS
                     MPILKDLLQHTANWSTVNVEQYPAPLECYDDSAQVSVERFAQLCRELIDTLRAIRQPY
                     NISFATEICYTCGERCVYHNGPRLCCCWQ"
ORIGIN      
        1 atgagtgttc agactccacc cacactccag aagctggcaa ggcaagctct ggtgagaaat
       61 gaggctgtgg ccgtgtcctg tgtgggggag ctgcctactg tgctcttccc agcactgttc
      121 aaggaggcat tcgagggcag acacatcaac ctcgtgaagg aaatggtggc agattggcct
      181 tttccctctc tccctgtggg tgcattgatg aagacaccta acctggaaac tttgcaggct
      241 gtgctagatg gagtagacat gcgactgaca agaaagtttc accccaggag gacaaaacta
      301 caggttcttg atctgagaaa tgtacaccat tccttctgga acatatggac tggagaagag
      361 gacagcagct gttcagcaga gaatttggag gaaaagccag tagtgaaggt ctttcccaaa
      421 tatgcactga gagatcagtg tgtgaaggtg atagttgaat tgtgtatctg gtcctgcctt
      481 gatgaagcac aagcatactt cttgaagtgg gcccagcaga gaaaggcctc cctacatttc
      541 tgctgtacaa agatgaagat ctggcgcctg ccagtccatg ctatcagaga gatcatgaat
      601 gtttttgatc cacaacatat cacagaatta gaactgcatg cagagcagac tctgttagac
      661 ctggaagatt ttgctgccta ctttggacag atgagaaatc tccgcaaact cttcctggaa
      721 gccctgcaag ggatgatctc ctctaatcga aatgaaacaa gagacagaga agccaactat
      781 atgaagaatt ttatatctca attctgcaaa ttcaattgtc tccagcatct ctgtgtccat
      841 tttctcagag atcacatgaa tcaagtccta gggtgcctga tgacgccttt ggagaccctc
      901 tcagttactt gctacataat ttcacagaat gagttgaatt ccttctcctg ctgtaagagc
      961 ctctttcagt taaaacatct ggaattgaga ggagtgatct tacatgatgt ggatattatg
     1021 tctctgagag gtttcctaga gaaagtggca gacactcttg agactctgga tttgcagtgt
     1081 tgtaggatga aggactctca gctttatgcc ctcctacctg ccctcagaaa tttctctcag
     1141 ctcaccacgg tcaagttcta cagcaacaaa ttctccatgc ccattctgaa ggacctgttg
     1201 cagcacacag ccaactggag cacggtgaac gtggaacaat accctgcccc tctggagtgc
     1261 tatgatgact cagctcaagt ttctgtggaa agatttgccc aactttgtcg tgagctcata
     1321 gatacactca gggcaatacg gcagccctat aacatctcct ttgctacaga aatctgttat
     1381 acatgtggtg agcgctgtgt ctatcataat gggcccaggc tttgttgttg ctggcagtaa
     1441 attgggaaat agaacttctg tatttcaata agaaccaggc ttgggttga
//
