LOCUS       XM_039091212            1095 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus igE-binding protein-like
            (LOC120096214), mRNA.
ACCESSION   XM_039091212
VERSION     XM_039091212.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1095
                     /gene="LOC120096214"
                     /note="igE-binding protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 14% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120096214"
                     /db_xref="RGD:41125722"
     CDS             1..1095
                     /gene="LOC120096214"
                     /codon_start=1
                     /product="igE-binding protein-like"
                     /protein_id="XP_038947140.1"
                     /db_xref="GeneID:120096214"
                     /db_xref="RGD:41125722"
                     /translation="MVPDRVRRKLRMTFPVFETREGERVHAPVEYNQIKELAESVRKY
                     GVTANFTITILERLALNYLTPADWQMIAKATLVNMGQYMEWKALWYEAAQTQARANAT
                     ALTPEQQEWTFELLTGQGRFAADQANYHWGAYVQVSSSAIKAWKALTKKGGAGNQLTH
                     IIQGPQEPFSDFVARMTETAGRIFGDVEQGAPLIEQLVYEQATQECRAAIAPRKNKGL
                     QDWLRVCREFGGPPTNAGLAAAILQSRQRPLKGTDTRSCFQCGKMGHLKRDCRKTKVD
                     RRPATICARCGKGYHRPDQCRSVRDIKGKLLPLLEVQPNGMSKNGSLGPRSQGPQRYG
                     NRFQKAMTLTEETPQEVTQNWTCVPPPTSF"
ORIGIN      
        1 atggtccctg atagggtgag aaggaagctg cggatgacgt tcccggtctt tgaaacgcgg
       61 gagggtgagc gggttcatgc cccagtcgaa tataatcaga taaaagagct ggcggagtct
      121 gtcagaaagt acggagttac agccaatttc accataacca ttcttgaaag gctggctcta
      181 aattatttga cacccgccga ttggcagatg attgcaaaag cgacccttgt gaacatgggc
      241 caatatatgg aatggaaggc cctttggtat gaagcggctc aaacacaggc cagagctaat
      301 gccacggcgt taacgcctga gcagcaagaa tggacgtttg aactcttgac aggacagggt
      361 cgcttcgcag cggaccaagc taattaccat tggggcgctt atgttcaagt ctccagctcg
      421 gccattaagg cctggaaggc actcaccaag aaaggagggg ccggtaatca acttactcat
      481 atcatccagg gacctcagga accgttctca gacttcgtag ccagaatgac agagactgca
      541 ggacgaatat ttggtgatgt ggagcaagga gcaccgctca tagaacagct cgtttatgaa
      601 caagccactc aggaatgccg ggcagctata gcacccagaa aaaacaaagg attacaggac
      661 tggctcagag tctgcagaga attcggcggg cctcctacta acgcaggctt ggcggccgcc
      721 attctccagt cccggcaacg tccccttaaa gggacagata caagatcatg ttttcaatgt
      781 ggaaaaatgg gccatttaaa aagagactgt aggaaaacca aggtagacag gaggcctgca
      841 actatctgtg cccgatgtgg caagggctac cataggcctg accagtgccg ctcagtgagg
      901 gatattaagg gaaaattact ccctcttttg gaagttcagc ctaatgggat gtcaaaaaac
      961 ggatcgttgg gcccccggtc ccagggccct caaagatatg ggaaccgctt tcagaaagcc
     1021 atgaccctga cagaggagac tccccaagag gtgacacaaa attggacctg tgtgccgcct
     1081 ccgacttctt tctaa
//
