LOCUS       XM_039090115             543 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus spore coat protein SP96-like
            (LOC120095958), mRNA.
ACCESSION   XM_039090115
VERSION     XM_039090115.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..543
                     /gene="LOC120095958"
                     /note="spore coat protein SP96-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 25% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:120095958"
                     /db_xref="RGD:41386117"
     CDS             1..543
                     /gene="LOC120095958"
                     /codon_start=1
                     /product="spore coat protein SP96-like"
                     /protein_id="XP_038946043.1"
                     /db_xref="GeneID:120095958"
                     /db_xref="RGD:41386117"
                     /translation="MEITSEMISLERLTACANSESSATPETSATTETSATTATSVTTA
                     TTATTERGATTETSATTATSVTTATTATTGTRVTTESSATPITTSTLGNTATSQTSSS
                     ATPETSATTETTFTTVTTSTAESSATPVTSGTTESSATSQSSATSESSATPETSASTE
                     TNVTTCHSRNQCHSRNQCHY"
ORIGIN      
        1 atggagatca cgagcgaaat gatctcgctg gagagactga cagcatgtgc caattctgaa
       61 tccagtgcca ctccagaaac aagtgccact actgaaacaa gtgctactac tgcaaccagt
      121 gtcactactg caaccactgc aacaactgaa cgaggtgcca ctactgaaac aagtgctact
      181 actgcaacca gtgtcactac tgcaaccact gcaacaactg gaacgagggt cactactgag
      241 tccagtgcca ctcctataac aacttccact ctgggaaaca ctgccacttc acaaaccagt
      301 tccagtgcca ctccagaaac cagtgccact actgaaacca ctttcactac tgtaaccact
      361 tcaacagctg aatccagtgc cactcctgta accagtggaa caactgaatc cagtgccact
      421 tctcaatcca gtgccacttc tgaatccagt gccactccag aaaccagtgc cagtactgaa
      481 accaatgtca ctacttgcca ctccagaaac cagtgccact ccagaaacca gtgccactac
      541 tga
//
