LOCUS       XM_039090111            3461 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mucin-12-like (LOC120095954), mRNA.
ACCESSION   XM_039090111
VERSION     XM_039090111.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3461
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3461
                     /gene="LOC120095954"
                     /note="mucin-12-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein, and 94%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:120095954"
                     /db_xref="RGD:41019124"
     CDS             69..3461
                     /gene="LOC120095954"
                     /codon_start=1
                     /product="mucin-12-like"
                     /protein_id="XP_038946039.1"
                     /db_xref="GeneID:120095954"
                     /db_xref="RGD:41019124"
                     /translation="MNISTEETHGAVITQRMFIPGPSKFINTSQSTEPAVTSHTSLSS
                     ETSGSSAISSSSSISTQTTGGTETSQTVFALGSTTFPTSSRSTETTPLPESSYTSLLN
                     EASTPVPRTSVSSQTMGTSQRVFTQESTSLTGSSGSTETTVPSDTSFTTASTEAPQTW
                     TSSQISTLGTPPTENSHTIVLTQESTTYPSRPTSTETTVPTDTSTTTAQTETSAASAS
                     SPISTPRSQTASQTVLTAESTTWRSSSISTETPVAPETSFSTALTDVSTTSPARTAST
                     NETHGTVTSQTGFTPGSATFPTSSWSTEPAVTSETSYTSADNEASTASPSTVISTQAT
                     QTIGTSQTVPTQESTTLPTESVSTETAGSPPMTHTTSLTETSTASPGAPISTQGTETS
                     EKPQTIFTQETTTYPHTTISTETAVPPDTSPSTAVTGTFTTSTTVPVSTQETQATDTS
                     QTALTQESTTFPSSTFSTDTSVPPDILLSTALSDYFTTSPTITVSTQEPRETETSHTM
                     FTPGSTTFPTSSQSTETAVTSHTPLSTETSGSSAISSSSSISTQTTGGTETSQTVFAL
                     GSTTFPTSSRSTETTLLPESSYTSLLNEASTPVPRTSVSSQTMGTSQRVFTQESTSLT
                     GSSGSTETTVPSDTSFTTATTEAPQTWTSSQISTLGTPPTENPQTIVLTQGSTTYPSR
                     PTSTETTVPTDTSTTTAQTETSAASASSPISTPRSQTASQTVLTEESTTWRSSSISTE
                     TAVAPETSFSIALTDVSTTSPARTASTNETHGTVTSQTGFTPGSATFPTSSWSTEPAV
                     TSETSYTSADNEASAASPSTVISTQATQTIGTSQTVPTQESTTLPTGSVSTETAGSPP
                     MTHTTSLTETSTASPGAPISTQGTQTSEKPQTIFTQETTTYPHTTISTETAVPPDTSP
                     STAVTGTFTTSTTVPVSTQETQATDTSQTALTQESTTFPPSTLSTDTSVPPDILLSTA
                     LSDYFTTSPTITVSTQEPRETETSHTMFTPGSTTFPTSSQSAETAVTSHTPLSTETSG
                     SSAISSSSSISTQTTGGTETSQTVFALGSTTFPTSSRSTETTLHPESSYTSLLNEAST
                     PVPRTSVSSQTMGTSQRVFTQESTSLTDLDKQPNFYPWDSTD"
ORIGIN      
        1 agacatctgt agctcctgac acctcattct ccacagtgct aactgatgtg tctacaacct
       61 ccgaaacaat gaatatttca acagaagaaa ctcacggggc tgtgattaca caaagaatgt
      121 tcattccagg accttccaaa ttcataaaca cttcccagtc cacagaacca gctgtaacct
      181 cccacacctc actctccagt gagacgagtg gttcatctgc catctcttca agcagctcaa
      241 tttcaacaca aaccactggt ggaactgaga cttcccaaac agtctttgct ctgggctcta
      301 caaccttccc caccagctct aggtccacag aaacaactcc acttcctgag tcctcttaca
      361 catcgctcct gaatgaagct tctacccctg tcccaagaac ctcagtgtcc agtcagacca
      421 tggggacatc ccaaagagtc ttcactcagg aatctacatc actgacaggt agctctggtt
      481 caacggaaac caccgtccca tctgacacct ccttcaccac agcctcgact gaggcccctc
      541 agacctggac aagcagccaa atttctaccc ttgggactcc accgactgag aattctcaca
      601 caatagtctt gactcaggag tctacgacct acccaagcag gccaacttcc acagaaacaa
      661 ccgtgcccac cgacacctcc accactacag cacaaactga gacatctgca gcgtcagcca
      721 gcagcccaat ttcaacacca cgaagtcaaa cagcttccca aacagtcttg actgcggaat
      781 ccaccacctg gagaagcagc tcaatttcca ccgagacacc tgtagctcct gaaacatcgt
      841 tctccacagc gctgactgat gtgtctacaa cctccccagc aaggactgct tcaactaacg
      901 aaactcacgg gactgtgact tcccaaacag ggttcactcc gggatctgcc accttcccaa
      961 caagctcgtg gtccacagaa cccgctgtaa cttctgagac ctcctacact tcagctgaca
     1021 acgaggcttc tacagcttcc ccaagcacag tgatttcaac tcaagcaaca caaacaattg
     1081 gcacatccca aactgtcccc actcaggaat ctacaactct cccgacagag tcagtttcca
     1141 cagaaacggc tggatcacct ccgatgaccc ataccacgtc tctaacggag acctccacag
     1201 catctcctgg cgccccaatt tcaacacaag gaactgaaac ctctgagaag ccccaaacca
     1261 tcttcactca ggaaactact acctacccac acaccacaat ttccacagag acagcggtgc
     1321 ctcctgacac ctcaccctcc acagctgtga ctggtacatt caccacctcc acaacagtcc
     1381 cggtttcaac ccaagaaact caagcaaccg acacttccca aacagccctc acacaggaat
     1441 caacaacgtt cccttcaagc acattttcca cagatacatc tgtacctcct gacatcttgc
     1501 tctccacagc cctgagtgac tactttacaa cctctcccac aatcacagtt tcaacacaag
     1561 aacctcgtga aactgagact tcacacacca tgttcacacc gggatctaca accttcccaa
     1621 ccagctccca gtccacagaa acagctgtca cctcccacac cccactctcc actgagacga
     1681 gtggttcatc tgccatctct tcaagcagct caatttcaac acaaaccact ggtggaactg
     1741 agacttccca aacagtcttt gctctgggct ctacaacctt ccccaccagc tctaggtcca
     1801 cagaaacaac tctgcttcct gagtcctctt acacatcgct cctgaatgaa gcttctaccc
     1861 ctgtcccaag aacctcagtg tccagtcaga caatggggac atcccaaaga gtcttcactc
     1921 aggaatctac atcactgaca ggtagctctg gttcaacgga aaccaccgtc ccatctgaca
     1981 cctccttcac cacagccacg actgaggccc ctcagacctg gacaagcagc caaatttcta
     2041 cccttgggac tccaccgact gagaatcctc aaacaatagt cttgactcag gggtctacga
     2101 cctacccaag caggccaact tccacagaaa caaccgtgcc caccgacacc tccaccacta
     2161 cagcacaaac tgagacatct gcagcgtcag ccagcagccc aatttcaaca ccacgaagtc
     2221 aaacagcttc ccaaacagtc ttgactgagg aatccaccac ctggagaagc agctcaattt
     2281 ccaccgagac agctgtagct cctgaaacat cgttctccat agcgctgact gatgtgtcta
     2341 caacctcccc agcaaggact gcttcaacta acgaaactca cgggactgtg acttcccaaa
     2401 cagggttcac tccgggatct gccaccttcc caacaagctc gtggtccaca gaacccgctg
     2461 taacttctga gacctcctac acttcagctg acaacgaggc ttctgcagct tccccaagca
     2521 cagtgatttc aactcaagca acacaaacaa ttggcacatc ccaaactgtc cccactcagg
     2581 aatctacaac tctcccgaca gggtcagttt ccacagaaac ggctggatca cctccgatga
     2641 cccataccac gtctctaacg gagacttcca cagcatctcc tggcgcccca atttcaacac
     2701 aaggaactca aacctctgag aagccccaaa ccatcttcac tcaggaaact actacctacc
     2761 cacacaccac aatttccaca gagacagcgg tgcctcctga cacctcaccc tccacagctg
     2821 tgactggtac attcaccacc tccacaacag tcccggtttc aacccaagaa actcaagcaa
     2881 ccgacacttc ccaaacagcc ctcacacagg aatcaacaac gttccctcca agcacacttt
     2941 ccacagatac atctgtacct cctgacatct tgctctccac agccctgagt gactacttta
     3001 caacctctcc cacaatcaca gtttcaacac aagaacctcg tgaaactgag acttcacaca
     3061 ccatgttcac accgggatct acaaccttcc caaccagctc ccagtccgca gaaacagctg
     3121 tcacctccca caccccactc tccactgaga cgagtggttc atctgccatc tcttcaagca
     3181 gctcaatttc aacacaaacc actggtggaa ctgagacttc ccaaacagtc tttgctctgg
     3241 gctctacaac cttccccacc agctctaggt ccacagaaac aactctacat cctgagtcct
     3301 cttacacatc gctcctgaat gaagcttcta cccctgtccc aagaacctca gtgtccagtc
     3361 agacaatggg gacatcccaa agagtcttca ctcaggaatc tacatcactg acagacctgg
     3421 acaagcagcc aaatttctac ccttgggact ccaccgactg a
//
