LOCUS       XM_039089999            1771 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus paired immunoglobulin-like type 2
            receptor beta (LOC120095898), transcript variant X1, mRNA.
ACCESSION   XM_039089999
VERSION     XM_039089999.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1771
                     /gene="LOC120095898"
                     /note="paired immunoglobulin-like type 2 receptor beta;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 8 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     12 samples with support for all annotated introns"
                     /db_xref="GeneID:120095898"
                     /db_xref="RGD:40977068"
     CDS             153..902
                     /gene="LOC120095898"
                     /codon_start=1
                     /product="paired immunoglobulin-like type 2 receptor beta
                     isoform X1"
                     /protein_id="XP_038945927.1"
                     /db_xref="GeneID:120095898"
                     /db_xref="RGD:40977068"
                     /translation="MALLVSLPGRNLAMPQLLILLSASCLHTGNSAGYTRVNDFGVNQ
                     PAVLSGVQGGSIEIPFSFYFPWELAKDPQMSIAWRWKDFHGEFIYNSTLAFLHEHFKG
                     RVIVNWTQGQTSGVLRILNLKENDQARYISRVSLQTTEGMKSWQSVAGTQLIIIHAPS
                     TTVVSPSIIPSAVPTAGLEDTRGQRNPSLLKLGAMVGMVMSKVVVIIPLYGWVIFLWW
                     KQRTQFRRDLVSEHPWKNFVPILPAESSSFL"
ORIGIN      
        1 aaggaagttg ctggccacac agaggtggag atggtcctgt caaactcagt cgtccatttg
       61 agaatgtctg agcatgtggt tttatttacc ctgattctct ctggactgct gagtgcccca
      121 gtgtccctag acagggcaac cttgactgcc tgatggccct gctggtctca cttcctggaa
      181 ggaatctggc tatgcctcaa ctccttattt tgctgtcggc atcatgtctt cacactggga
      241 actcagcagg atacacaagg gtaaatgact ttggtgtcaa ccaaccagct gtcctctctg
      301 gagtccaggg cggctccatt gagatcccct tctccttcta cttcccctgg gagttggcca
      361 aggatcctca aatgagcata gcctggagat ggaaggactt ccatggggaa ttcatctaca
      421 actccacctt ggctttcctt catgaacatt ttaagggccg ggttattgtg aattggacac
      481 agggtcagac atctggtgtc ctcagaatcc tgaacttaaa ggagaatgac caggccagat
      541 atatcagcag agtttctctg caaacaactg aaggcatgaa gtcgtggcag tctgtagctg
      601 gaacccaact catcatcatt catgctccca gtactaccgt ggtgagcccc tccatcatcc
      661 cctctgccgt ccccacagct ggtctggagg acacaagggg ccagaggaat ccttcactgc
      721 tgaaattggg agccatggtt gggatggtca tgtccaaagt tgtggtcatc atccccctct
      781 atggatgggt gatcttcctg tggtggaagc aaaggacaca attcagaaga gatcttgtga
      841 gtgaacaccc ctggaaaaac tttgttccta tccttccagc agagagctca tctttcctgt
      901 agaccttaag gtcagaagaa gaaccagtcc agcaaatgaa agtctcactc caagaaatcc
      961 ttctcagtat ttgtcttgac ccttttctcc catgtgtgac ctctaagaga gtggcagact
     1021 ctgtctagga tacaagtcag tgggacaggg gcaaggacca gggtccatat tgagaataac
     1081 agcctgagaa tcagggttcc cctctccctt attccctgca cactgccatc tcatctagaa
     1141 acttgacccc cctccctcca tgctttacat tcagtgacag acaacatgtc atgtttaatg
     1201 cccatgttgg gcttttcctg aaaggtccaa gtatacacac taattttctc atttcctgcc
     1261 atgttgatat tctggactct gggttctctt ctaggatagt tcctttttgc catgttcagt
     1321 ctgtcttaac ttttgatagt cagcagacct gctcctaaca gaacacagaa actttccatt
     1381 ccgacccatg cttgatagag ttccttcaag cacagtgtgt catagctgca gtgtggtacc
     1441 aatgtgtaga gggccgcaat aacattcgcc accgctagat ggcgctggct tccactgtgc
     1501 cccatgtgga aggtcaggat agcctccgcc attacaagat ggcgccagcc ttcgccgcgc
     1561 cagccgactc cctttcagga agttaactgt gcgcatgtgc aagagtgcct tcatgccagg
     1621 tctttgccca ctctggggcg tgcctgatga gatcatgggt aaacaaccaa tcaggtgtgg
     1681 atgtgccacg ctagggtgta tataagcaca ccatgttagc gcgccaaggc ttcctcttta
     1741 agatcataat aaagtttggt cacagtaagg a
//
