LOCUS       XM_039089980            1749 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus NXPE family member 3-like
            (LOC120095896), mRNA.
ACCESSION   XM_039089980
VERSION     XM_039089980.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086030) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1749
                     /gene="LOC120095896"
                     /note="NXPE family member 3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 1 Protein"
                     /db_xref="GeneID:120095896"
                     /db_xref="RGD:41070362"
     CDS             11..1570
                     /gene="LOC120095896"
                     /codon_start=1
                     /product="NXPE family member 3-like"
                     /protein_id="XP_038945908.1"
                     /db_xref="GeneID:120095896"
                     /db_xref="RGD:41070362"
                     /translation="MTTWHEPIIRLLPPPHPVSEDVSETIDRDSVSQELFNLTNLLYW
                     PPTGGDRDDFLASTSPRTSTYHLKGPAQANYTLGSNLEAILVARDHWGRPKAHGGDLF
                     RAQLLGPELRAGVPGEVKDLENGTYLLSFPLLWAGWAQVQVRLIHSSEAVGVLQRVWR
                     GKRATVDFRGYFRGTNGIQETVICNVDPQSTGAKGSTCHYKDVVSGEIWFCAQPRTLP
                     CNALVGHSSGSYLKVTTPHDQDLLAGNVTDQKLPSGVPPILVLPAAWGNMSNMALPSR
                     PPCHPGHLSPKPSGFYHQDRWYSTFCSSRSFLTVDSILNCLAGRIVYMMGDSTLRQWW
                     EYLRDTVPSLKPVDLHATYQVGPLMAVETTRGTVLHWRAHSWPLRSRLTPVASLHSVA
                     RELYGLAGGPYTVVVLGMGAHFTTFPPSIFARRLAGIRAAVKALLDREPSTLVVIKLA
                     NTGYKSVYGSDWLTLQMNRFLRAAFVGLRVAFVDAWEMTSSLAVPDDIHPRKLIVRNE
                     VELFLSFICPT"
     polyA_site      1749
                     /gene="LOC120095896"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttctggctc atgaccactt ggcatgagcc cataatccgg ttgctcccac caccccatcc
       61 tgtctctgaa gatgtctcag agaccatcga cagggactct gtctctcaag aactcttcaa
      121 cttgaccaac cttctatact ggcctccaac tggtggagac agggatgact ttctggcctc
      181 taccagcccc agaacctcta cctaccactt gaaaggacct gcccaggcca actatactct
      241 gggaagtaac ctagaggcca ttcttgtggc tcgggatcac tggggtaggc ccaaagctca
      301 tggtggagat ctgtttcggg cacagctgct gggtccagaa ttgagagcag gagtcccagg
      361 ggaggtgaag gatctggaga atggcactta cctcttgtcc ttccccctgc tctgggctgg
      421 atgggcccag gtgcaagtga gactgatcca ctccagtgag gcagttgggg tcctgcaaag
      481 agtctggaga ggaaaacgag ccactgttga ttttagaggg tatttccgag gaacaaatgg
      541 cattcaagag actgtcatct gtaatgtgga cccccagtca actggagcca aagggtctac
      601 ctgccattac aaggatgtgg tttctgggga gatctggttc tgtgctcaac cccgtacttt
      661 gccttgcaat gctttagtgg gtcactcgag tggaagttat ctgaaggtga ccacgccaca
      721 tgatcaagac ctgctggctg ggaatgtgac tgaccagaaa ctcccttcag gtgtacctcc
      781 aatccttgtc ctaccagcag cctggggaaa catgagtaac atggccctgc cctcaaggcc
      841 cccatgtcac cctggccacc tatctccaaa accctctggc ttctaccacc aagacagatg
      901 gtattcgaca ttctgttcta gccgctcttt cctcactgtg gacagcatcc tgaactgcct
      961 ggctggacgc attgtctaca tgatggggga ttccacactc cggcagtggt gggagtatct
     1021 gcgcgacaca gttccctccc tgaaaccagt tgatctacac gccacttatc aagtaggtcc
     1081 cctgatggcc gtggagacaa ctcgggggac cgtgttgcac tggagggcac acagctggcc
     1141 cctgcgctct cgtctcaccc cagtggcctc cctgcactct gtggccagag aactatatgg
     1201 cctggccggg ggaccctaca cagtggtggt gctgggtatg ggagcccact ttaccacgtt
     1261 ccctccatcc atctttgctc gaagactggc agggattcgg gcagctgtga aggccctgct
     1321 ggaccgggaa cccagtactc tggtcgtcat caaactggcc aacactggct acaaatcggt
     1381 gtatggcagt gactggctca cactccagat gaaccgcttc ctccgcgctg cctttgttgg
     1441 tctccgcgtg gcctttgtgg atgcgtggga aatgacttcc agcttggctg tgccagacga
     1501 catccaccca aggaagctta ttgtccgcaa tgaagtggaa ttatttctgt ccttcatctg
     1561 tcccacctga gtgctcctga gggatctgag gctgaatgga ttgagagaga gcctgggtgt
     1621 ggccgtctca aatgaacttc tgtgatggaa acctgaagct accctggctc acccactatg
     1681 acactgtggg tccatatttc atacttctct ctgtgagtca cgtggagaaa tctagttcaa
     1741 tacaaatga
//
