LOCUS       XM_039089913            2861 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC120095871), transcript variant X1, mRNA.
ACCESSION   XM_039089913
VERSION     XM_039089913.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039089913.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2861
                     /gene="LOC120095871"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 220 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:120095871"
                     /db_xref="RGD:41347965"
     CDS             149..1552
                     /gene="LOC120095871"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038945841.1"
                     /db_xref="GeneID:120095871"
                     /db_xref="RGD:41347965"
                     /translation="MDAMTFNDVHVDFTSEEWALLDRSQKGLYKDVMLETYWNLTAIG
                     YSLEDHNIEEHFQSSRRHGRPERSHTEEKPYEDMKCGEAFAHRSSLRAHERTHTGEKP
                     YGCNQCDKAFAYHSSLRIHERTHTGDKLYKCIQCGKAFSDQNTLQRHKRTHSEEKLYE
                     CNQCGKAFACHNILQNHERTHTGKKTYKCNKCDKAFTQRYYVRIHKRTHTGEKPYKCN
                     QCGKSFACLSSLRVHERTHTREKPYKCNQCSKDFASQSHLKRHERIHTGEKPYECNQC
                     GKAFSIQDTLRVHERTHTGEKPFECNQCGKTFKLHSQLRIHKRVHTGEKPHECDQCGK
                     TFACPSSFQKHKRIHSGEKPYGCNQCDKAFAYHSSLRIHERTHTGEKPFKCNQCGKIF
                     SQPNSLRIHKRTHTGEKPYECNQCGKAFPYDSSLRVHERTHTGVKPYECNQCGKAFGY
                     HSHLQRHERTHTGQKPY"
ORIGIN      
        1 gacctgtcag tcagaagaga aggagggctc ttccgggtac ggtaccggga gtccagctct
       61 gcagctgagc aggcttgaat gtgtgacgtg ctctgtgcgc tgcagtgtgg tgcggcgagg
      121 gagctcaggc gaggtctgca gtcacggcat ggatgcaatg acctttaacg atgtgcatgt
      181 ggacttcact tccgaagagt gggctttgtt ggatcgttcc cagaaaggtc tttacaaaga
      241 tgtgatgctg gagacctact ggaacctcac tgctataggt tacagtttgg aagaccataa
      301 tattgaagaa cattttcaaa gttctagaag acatggaaga cctgaaagaa gtcatactga
      361 agagaaaccc tatgaagata tgaagtgtgg tgaagccttt gcacatcgca gtagtcttcg
      421 agcacatgaa aggacacaca ctggagagaa accctatgga tgcaatcagt gtgataaagc
      481 ctttgcgtat cacagcagtc ttcgaataca tgaaaggaca cacactggag ataaactcta
      541 caaatgtatt caatgtggca aagctttttc agatcagaac actctacaaa gacataaaag
      601 aacccactcg gaagagaaac tctatgaatg taatcaatgt ggtaaagcct ttgcatgtca
      661 taatattctt caaaatcatg aaagaactca cactggaaag aaaacttaca aatgtaataa
      721 atgtgataag gcctttacac aacgctatta tgtgcgaatc cataaaagaa cacacactgg
      781 agagaaacct tacaaatgta atcagtgtgg taaatccttt gcgtgtctca gcagtctccg
      841 agtgcatgaa agaacacata ctagagagaa gccctacaaa tgtaatcagt gtagtaaaga
      901 ctttgcgagt cagagtcatc ttaaaagaca tgaaaggata catactggag agaaacccta
      961 tgaatgtaat caatgtggta aagccttttc aatccaggat actctccgag tgcatgaaag
     1021 aacacatact ggagagaaac cctttgaatg taaccagtgc ggtaaaacct ttaaactaca
     1081 cagtcaactt cgaatacata aaagagtaca cactggagag aaaccccatg aatgtgatca
     1141 gtgtggtaaa accttcgcat gtcccagtag tttccaaaaa cacaaaagaa tacattctgg
     1201 agagaaaccc tatggatgca atcagtgtga taaagccttt gcatatcaca gtagtcttcg
     1261 aatacatgaa agaacacata ctggagagaa acccttcaaa tgtaatcaat gtggtaaaat
     1321 cttttcacag cccaatagtc ttcgaataca taaaagaaca catactggag agaaacccta
     1381 tgaatgtaat caatgtggta aggcctttcc gtatgacagc agtctccggg tgcatgaaag
     1441 aacccatact ggcgtgaagc cttacgaatg taaccagtgt ggcaaagcct ttggctacca
     1501 cagtcatctc caaaggcatg aaaggacaca cactggacag aaaccttatt aacatgagca
     1561 atgtgggaaa gcctttgtaa gtctcagcaa acttcagagg cataaatgaa ttcatcctgg
     1621 agagaaagct caagaatgta tttaatatgg tgaaggcgtt aaacggtttt atagtcttca
     1681 tcatcacaaa agtataccag agagaaattc tatgagtgta ggcaatgtgc tgaagacttt
     1741 atgttatgga gcccacttag agatccaaca cgacacaaaa accagggcta cgggtattca
     1801 ctatgtagtt gatctgtgtc cactgatgca ggcaggatgt aggttttaca gtctaaagat
     1861 catatccatt ttctctttgt ggttaacaac aggtattgtg tttttggggg aaaaaaagat
     1921 gaataacaga agctgtcgtt tggaacagtc aatatgtttt gtggaatggg aaacgtggtt
     1981 aggaacaatc atgttttggg aaacaaaaat gaattatgga agcttatcaa ttattaggga
     2041 gtttccagct cccttatgtt ctgggaactt gaatttagtt tcgctctatg attaaatgaa
     2101 gtcttatagc aaaatggctg tacttaggac agtttctttt acttgttcat ggtatttgca
     2161 tattacagtc atcttcgaat tcataaaagt gagtacccct ataaatgggg tcaatattag
     2221 gaggcctttt ctcagaacag ttatttacaa atatctaaaa gaacatgtcc tggcaagaaa
     2281 ccctacaaat gtaatcaatg tgattaagcc ttttcataac acagttatat gcgactaggt
     2341 agaagaacac ctgcctgaga cgacactagg aggtaagcaa tgtggtaaaa cctgtgcgag
     2401 taactgtgct caggagaaaa agccatagtg caaagaaacc tgtgaatgca gtcattgtgg
     2461 taaagcttta cgtgttatga tctctttatg caatattaaa agccttagtg tgcaattaat
     2521 ctgttaaaga ctttacacat cacagtagta tttagggacc tgaaagaatt catactatag
     2581 gggatctata aggatcctat aagaactgta gccaacatac ttcagttgca caagattatt
     2641 ctgaagagaa catctgacca gtgtaaacaa tcaagcatta tggtgttcct cttggtttta
     2701 tttgtacttg taaattcata tgcgcaattg tatgaattta agtgatagcc cttttagact
     2761 tcacaattct cttcaattac tcatccagat gtaaaagttt acgggtgtga actactgcct
     2821 tttttgttgc tataataaaa catcgtgcct agggcaactt a
//
