LOCUS       XM_039087586            4688 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus multidrug resistance-associated
            protein 1-like (LOC120095234), mRNA.
ACCESSION   XM_039087586
VERSION     XM_039087586.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087586.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4688
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4688
                     /gene="LOC120095234"
                     /note="multidrug resistance-associated protein 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 ESTs, 1 long SRA read, 2 Proteins, and
                     98% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:120095234"
                     /db_xref="RGD:40969829"
     CDS             282..1424
                     /gene="LOC120095234"
                     /codon_start=1
                     /product="multidrug resistance-associated protein 1-like"
                     /protein_id="XP_038943514.1"
                     /db_xref="GeneID:120095234"
                     /db_xref="RGD:40969829"
                     /translation="MTHLNKAKTALGFFLWIICWADLFYSFWERSQGMLLAPVLLVSP
                     TLLGITMLLATFLIQFERRKGVQSSGIMLTFWLVALLCALAILRSKIISALKKDAQVD
                     MFRDSAFYLYFTPVFIQLVLSCFSDSSPLFSKTVRDPNLCLDIPVSWAVPYKPAVYSI
                     PTSPQPLSVLQVGIVGRTGAGKSSLTLGLFWINESAEGEIIIDGINIAKIGLHNLRFK
                     ITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGG
                     ENLSVGQRQLVCLAWALLRKTKVLVLDEATAAVDLETDDLIQSTIWTQFEDSTVLTIA
                     HRLNTIMDYTRVIVLDKGEIRECGAPSELLQQRGVFYSMAKDAGLV"
ORIGIN      
        1 gctagaggtc tggtaaggct gtaaatctac gcgcgagtga aattggtacc tactactttc
       61 cacatcacag tagtaatgaa tcccggtgga agcatcataa tacggttggt tctcctttca
      121 aagtcaagac agattggaat gtcacatggc acaccagcaa ccctgacttt accaagtgct
      181 ttcagaatac ggtcctcaca tgggtgcctt gtttctacct ctggtcctgt ttccccctct
      241 acttcctcta tctctctcga catgaccggg gctacatcca gatgacacac ctcaacaaag
      301 ccaaaactgc cttaggattc tttctgtgga tcatctgctg ggcagacctc ttctactctt
      361 tctgggaaag aagtcaggga atgctcctag ccccggtgct actggtcagc ccgacactgc
      421 taggcatcac catgctgctc gccacctttt taattcagtt tgagcgaagg aaaggagtcc
      481 agtcctcagg gataatgctt actttctggc ttgtagccct actctgcgcc cttgccatct
      541 tgagatctaa gatcatctct gccttaaaaa aggatgctca agtggacatg tttcgagatt
      601 ctgcattcta tctctacttc acccccgtgt tcattcagct cgtgctgtcc tgcttctcag
      661 acagctcacc cttgttctct aaaactgtcc gtgacccaaa cctgtgcttg gatataccag
      721 tgtcctgggc tgtgccttac aagccagctg tctacagcat tcctacctca ccacagcccc
      781 tttctgtatt gcaggttggt attgtgggtc gtacaggagc tgggaaatca tctctcaccc
      841 tgggtttgtt ctggatcaat gagtctgcag aaggagagat catcattgat gggataaaca
      901 ttgctaagat tggcctgcac aacctgcgct tcaagatcac catcattcca caggatcctg
      961 ttttgttctc gggttccctc cgcatgaacc tggacccttt cagtcagtat tctgatgaag
     1021 aagtctggat ggctctggag cttgctcacc tgaagggctt tgtgtcagcc ttgcctgaca
     1081 agctgaacca tgagtgtgca gaaggtggag agaatctgag tgtggggcag cgacagcttg
     1141 tgtgcctggc ctgggctttg ctgaggaaga caaaggttct agtgttggac gaggctacag
     1201 cagctgtgga tctggagaca gatgacctta ttcagtccac catctggacg cagtttgaag
     1261 acagtactgt gctcactatt gctcatcggc tgaataccat aatggactat acaagggtga
     1321 ttgtcctgga caaaggagaa attcgggagt gtggtgcacc ctctgagctc ctgcagcaaa
     1381 gaggcgtctt ctatagcatg gccaaggatg ctggcttggt gtgaactgat ctctggcata
     1441 tctgatgagg actgcagggc caggatccca gtgtccaggc atgagccagc aaccctggaa
     1501 acctacactc cccagagaaa aaccaaaaat tgaaagaaaa ccaaattaaa aggaagcaaa
     1561 acacataaag catcagtcac agtttgcccc agcctggatc tgacctcgaa gaagccggaa
     1621 gacagatgtg ccccacttca aacacgtctg gcttctggca ccacttgtga ggctccctga
     1681 aagttcaccc atgctcctgc tgtatcccaa agcaaggcca tgagcagcca aacacactag
     1741 tgaccaaaca caagccactg cctcatgcct cttcagccac atttatagag gccaagccag
     1801 agcctctcct ggccctgcca gctcttctgt cacctacagt cctgttggtg acagaagagt
     1861 gtatcttgcc ttcaggtctt gcagttgaaa gcatggaaac caaaacaaac gaacaaaaaa
     1921 gagagaaaga aagaaaactc ctaaaaatcc tgtccctgtt atgtcagtga tgtccccctc
     1981 ctgccatctg gtcttcacac actctgacac cgttccctac attcagcagt gttcacagta
     2041 tgagctgtag acacagcttt gtgaagggac ctggtcaaac aggcttagaa ccaggccagg
     2101 caacactccc ttcacaagga cttctaccct gcccctgctt tccgtttctt tctgtccgta
     2161 ggtggagagg gctcatgcct cacataacat atgaatagtt ataagcagca aaagtcaaga
     2221 gcaggaggga tgaactggca agaatctggt atcaaagact gccagagtct cctataggac
     2281 aagaagagaa ccattcacag atatcaatga tttctacccc ctacttttga gcattgtttc
     2341 tggaagaaag atagtcccaa gaatttgatg tctaggaagg aggtactaga ttcaggaagc
     2401 ggccatgccc agctctgtac ttgatcctca gtctgaatac ttcaaagtgg ttctctaggt
     2461 gtgtgggtta cagaccaaag agagaccccc atgggcagca agaacttgat tccagccaca
     2521 gttcatactt gctatgaatt ttggctctga ttttggtccc agagaagtat cctttttctt
     2581 taggtggcga tatatatgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     2641 tatatatatg tatatatata tatatggtgt tatacatata tatttaacaa gtttgcatac
     2701 atgacagaac aacataaaat atagccttta acatccagaa acacctgagt caggtcccaa
     2761 gacaggttga gcacaggctc tataacagtg gttggggatc tgaaccccac ataggcttca
     2821 ggaggcttaa ttaagacagg agggccttga atgggtgtct ctttaagaaa aacagtctac
     2881 acaaatcttt attttgacac taaaagatta catatccatt ccaacagctt ttcctgtcct
     2941 ggcgacccaa taagttacac actggcactt ggaggctaat acgcaggtga tcactggtaa
     3001 cttcccacgg agacccccag aaggacacct tggggcatag gctgggggga cagctgcagt
     3061 ggaaccttcc ttccagatta ctacatcaga aaaagcagca tggttcttgg gggctgggca
     3121 acaggtggga cttcctggat ccaaggccaa ggtctagttg ctcagcaagg caccctgagg
     3181 gcagcgatga tggttccggt gccttcaatg gggcctttct cacagttgca caatgcccat
     3241 ggctccagat tccctaagat tatttgctag ttgcctcttt gctactgtgg ccagttggag
     3301 gttttgagga attagctttg atccaagggt actcaaggac ttctgctaat gttagccttt
     3361 ggcttgagtt gtgttttaac tgtcatgaaa tgaggtccct ggctccctct gtcacaaagt
     3421 cagggaatgt gaattcaacc cgtgatatcc ttctgtaggt ctcctgataa gtgtgtgtct
     3481 caaaggtatc ccctcaaagg tatccccact aggaattcat agcagagcac acccaggctc
     3541 cagagatcca cctcctcatc atgcatctgc ccttcaatca tctccggggg caggtagtcc
     3601 acggtgccgt acagcgtggg tctcctggaa gatggagcat gcgcagacca cccgaagtct
     3661 gcgagcttca actccccatt tgagccaagc agcgggttct ctggcttgat gtctctgtgg
     3721 atgactctct ttgaatggca ctaggacaaa gcattcgcca actccgtgat gtaggtagct
     3781 attctctgct cgtcaaactt ggagagtttt tgaagctctc tatacactgt tccaaggggc
     3841 gcatattcta gaattagata aactctggtg gcgtcatggg aatacccata caacccgagg
     3901 atgttggggt gccgcaggtg ggactggatc tccacttctc tccgaagctg gtgctccaca
     3961 cctgcttctc cagctgtact ttaaacagca tcttcagagc caggatgaac ttgctttgct
     4021 tctccctcgc caaatagaca tttccaaact tcccttttcc tagtgggcgg ccaatgtcaa
     4081 aatcttccaa agtccactcc cttctttttg agtcttcagt tttctggatg gatgtctgtt
     4141 ccttttcaga atttcccgag gctgcaggct gtggctgctc actcttctgg ggggttactt
     4201 agccgggacg caggtcgagg aacgctggca gctggcaact gctttagcac tgacttctga
     4261 cctgcgacag gtttctgtgc ttgtggaggg acacgctggg agttggaagg acacaggacc
     4321 cactgggcct ggccactgct cgctgatcct gggtgctgag aaggaatctg ctcagtcacc
     4381 aagactcgtt tcggaccgaa gggaactgtg gtcttaacag gcctggagac acagttttct
     4441 ttacatctgt ccatgtcacc ccggtgccac tcaaccttcg gtttgcagca tccaggctcg
     4501 tcctcaccag cccggtcccc ttccgactca caggcaggaa cccgctttat atttattttt
     4561 tataagttaa taccatcctt tcactttaaa ggacccagat ttctcctgag agtttctgta
     4621 atgacactgg aaatgtcact atttgataat aatttgcagt aaagaaaaat attttacttc
     4681 tttctaaa
//
