LOCUS       XM_039087582            1585 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cytochrome b-c1 complex subunit
            10-like (LOC120095229), mRNA.
ACCESSION   XM_039087582
VERSION     XM_039087582.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087582.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1585
                     /gene="LOC120095229"
                     /note="cytochrome b-c1 complex subunit 10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120095229"
                     /db_xref="RGD:40978598"
     CDS             1..285
                     /gene="LOC120095229"
                     /codon_start=1
                     /product="cytochrome b-c1 complex subunit 10-like"
                     /protein_id="XP_038943510.1"
                     /db_xref="GeneID:120095229"
                     /db_xref="RGD:40978598"
                     /translation="MKSWVHFPASHEPGHEIYICSAAGQWDRVTLECRDPAAVLSRFL
                     SLCYWELAKNWIPTSSVKGTVGAIGWLWASDWPLVLDWVPSINSKFKKGD"
ORIGIN      
        1 atgaagtcct gggttcattt cccagcctca catgaacctg ggcatgaaat atatatttgc
       61 agtgctgcag ggcagtggga cagggtgact cttgagtgtc gagatcctgc agcagtgctg
      121 agcaggtttc taagcctgtg ctactgggaa ctggccaaaa actggatccc tacatccagc
      181 gtgaagggca ccgtgggggc cataggatgg ctatgggcct cagactggcc gctggtcctg
      241 gactgggtgc cgtccatcaa tagcaagttt aagaagggtg attaggcagc ccctcctccc
      301 cccacaagcc tcactggtgt cacgcccact cccttagaga cagcttagct ctgtggagga
      361 tgctgaggaa gccgcacact gaggaagccc acatcactcc aggggagcat ccacattgat
      421 ggacatgggg cggccttgat gggggcagca ttaaaccttg tacttatact cggtgggggg
      481 gggggcaggg agaagtatgt attcctcagt gtgagctgct cagcttgcat gttgcttgta
      541 tgtgtattgt cagggctgac cgtttatatt agttaaccaa gtgctgtgct tccctgaagc
      601 agactccatc cagctcttcc tgtaattctt tgtgtaggtt gaggcctcat gaactttccc
      661 tgtccacgtt gacaccatag catattattt aaaaatgtgg tttaggggct ggagagatga
      721 tggctcagag gttaagagca ctgtctgctc ctccggagag ctggagttca atttccaaca
      781 accacacagt ggctcacaac catctgtaag gagatttggt gatctcttct ggcctgcagg
      841 catacatgaa ggcagaacgc tgtatacata gtaaataaat aaatctttta aaaatgtggt
      901 ttaatatctg catacttgat tgtgctgtgt tccttctgga tggcttgatg attccaagtt
      961 ttatttcaga gatagcacaa tgatggcctt tctgtgctgc agttaaagga ggtgtgagct
     1021 aatgggggcg gctgtcactg cgactgagta gttgagcctt tgggagttct aaagggtgct
     1081 caagcgcggt ttctcagtat atggagagct tctctctctc tctctctctc tctctctctc
     1141 tctctctctc tctctctttc tctctctctc tctctctctc tctctctctc tctctctctc
     1201 tctctctctc cgacttgcct tatcatttaa gctgtcgtcc ttcttttctg aggcctgagt
     1261 tttcttacct gaaaaatgga ctagttaatt tcagaatgtc ttccagtttc cagagccagc
     1321 gaccaaagca gcagtcagac caccagagtt gcctgttaac tgagctgagt gctgacactc
     1381 aggttgtggg caagtgggct tctagtctcc accccacacc cacccagagg cactgtgtag
     1441 ctatgtcgac aggctagaga aggatgccat cttattattg ctaatattag tttttgtgtc
     1501 ccaaagcctg agcaaggtcc tgcacttgtt acagaaatgt taccaggtaa gttttttctt
     1561 tggcatgtct aattgttctg ttttc
//
